Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01454 ATGGCAAGCAGCACCACTTTACTTGCTGCTATTCTAAAACTTCTCATCATTTTCTTATTCGCAGGTTGGGTTTCTCTTTGGCTTCTGAAGCCAACCCAAATATGGACAAGAAAATGGAAACATGCAGAAGATAGAGCCAATGATACAATTTTTGGATACTATGGTCTTAGCTTTGCTGTGTACACGTTTCCAATAATTGCTATTGCTATAATTGGACTTCTTTTATTGGATTTGAAAGCTGGATATCAAAGAAACAGAAGTGCAAGAAGTCCATCAAAATCAAATATCTTCTCAAATCCTCTGGTGGTGAACAGTACACTGGGAATCTTATCCAGTATTGAAATACTGGTAGCTTTCCTTTTTATCGTCTTCTTAGCATGGACCTACTACTCTCGTATTTCTGCAGACTTCAAAAAGTTGATGCCATACAAATCACTGAAGTTGAATACATGGCAACTCAAGTATCACAGAATAGCAACTCGGTCTGGCTTGCTAGCAGAAGCTTGCATGGCTTTGTTGCTTCTTCCTATTTTAAGGGGGTTGGCTGTGTTTCGCATACTTGGCATTCAATTTGAAGCTTCAGTTAGATACCACACCTGGGTCGGAACTGCAATGATACTTTTTGCTACAATACATGGCGCAAGCACTTTGTTGGTCTGGGGGGTCAGCCACCATATACAAGATGAGATTTGGAAGTGGCAAAAGACTGGACGCATATACCTCGCTGGGGAGATTGCACTTGTTATTGGGCTAGTCATTTGGGTCACTTCACTTCCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACACATCATTTGTATGCTGTCTTTCTAGTATTTTTCTTGTTTCATGGTGGGGATAGGCACTTTTATACGGTCTTCCCGGGAATATTCCTTTTTAGCCTTGATAAACTGATCCGAATCATACAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAGAATTTTTCCCGGCAGAGCTGTGGAGCTAATTCTGCCCAAAGATCCAGGGATGAAATATAACCCCACAAGTGTTATATTTTTGAAGATTCCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATAATATCTAGTTCCAGGGCTGATGACCACATTTTGTCTGTGATAATTAAATGTGAAGGGTGGTGGACTAATTCTCTTTATGACCTGATCCATGCTGAACTAGACAAAACTGCAGATAAAAGGAAGGGAATACCTGTTGCTATCGAAGGACCTTATGGACCTGCTTCATTAGACTTTTTGAGCTATGACACCCTTCTTCTGGTTGCTGGTGGAAGTGGAATAACCCCATTTCTGAGCATTTTGGCAGAAGCTGATTCAGCTACCAGAAAGAGTAGATTTTCCTCAAGAATACAACTTGTGTATGTCATTAAGAAGGCACAAGACTTCTGTCTGTTACATCCAATCTCACATCTGTTACTCAGCCAATCAACTGAAAAGTTCCATTTGAATCTGAAATTGTTTGTAACCCAAGAAACACAAGCAGGGGTGGGAATTAGGGAGCTATTAAATGAGTTCTTGAAAGTAAGAACCCTGCAAGTGAACAGCATGTGCTCAAATTATGCAGCATACGGGCCTGAAAGTCCATCTTGGATGGCTGCCATTGCAGGATTTTGCTCCATCACTTTCCTTATTTTCCTTATGTGTTTCAACCATATTATAATTCCCTCTGGAAAGCGCTCCAAAATGGCCAAAGAAAAGAATCCCTCTTGGGTTGTGGATCTTCTTCTGATAGCTGCTTTTGTCCTAGCTTTAGCTTGCAGCACCTCGGTGGCAGCTATTTTGAGATGGAGAAGGCTAAGGAAAGGGATTCCACAAATATCACATAGAGAAATTAAACCCATTGATCTAAGCTCAGATGAAGCAAGGAATGCACTTGAAGAACATGAAGTGCATTTTGGGGGAAGGCCTAACTTTAAAGATATATTTGGCAAGCTCCGGAATGAAAGCGGTGGATCTAATATTGGAGTTTTAGTTTGTGGACCTGAGAGCATGAAGGAATCAGTGGCGTTCGCATGCCAGCAGGAATCTGAGTGTTTTAAGGTTAGTGGAAAGAGAACAGAATCCTGCTTAACTTTCCACACTCTCAACTTCACGCTGTAG 2133 0.4093 MASSTTLLAAILKLLIIFLFAGWVSLWLLKPTQIWTRKWKHAEDRANDTIFGYYGLSFAVYTFPIIAIAIIGLLLLDLKAGYQRNRSARSPSKSNIFSNPLVVNSTLGILSSIEILVAFLFIVFLAWTYYSRISADFKKLMPYKSLKLNTWQLKYHRIATRSGLLAEACMALLLLPILRGLAVFRILGIQFEASVRYHTWVGTAMILFATIHGASTLLVWGVSHHIQDEIWKWQKTGRIYLAGEIALVIGLVIWVTSLPQIRRRKFEIFYYTHHLYAVFLVFFLFHGGDRHFYTVFPGIFLFSLDKLIRIIQSSPKTCMVSARIFPGRAVELILPKDPGMKYNPTSVIFLKIPTISHLQWHSFSIISSSRADDHILSVIIKCEGWWTNSLYDLIHAELDKTADKRKGIPVAIEGPYGPASLDFLSYDTLLLVAGGSGITPFLSILAEADSATRKSRFSSRIQLVYVIKKAQDFCLLHPISHLLLSQSTEKFHLNLKLFVTQETQAGVGIRELLNEFLKVRTLQVNSMCSNYAAYGPESPSWMAAIAGFCSITFLIFLMCFNHIIIPSGKRSKMAKEKNPSWVVDLLLIAAFVLALACSTSVAAILRWRRLRKGIPQISHREIKPIDLSSDEARNALEEHEVHFGGRPNFKDIFGKLRNESGGSNIGVLVCGPESMKESVAFACQQESECFKVSGKRTESCLTFHTLNFTL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01454 710 PANTHER NADPH OXIDASE 16 708 - -
Pumo4g01454 710 Gene3D - 598 708 IPR039261 -
Pumo4g01454 710 Gene3D - 410 543 IPR039261 -
Pumo4g01454 710 Pfam FAD-binding domain 320 420 IPR013112 GO:0016491
Pumo4g01454 710 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 297 422 IPR017927 GO:0016491
Pumo4g01454 710 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 410 522 IPR039261 -
Pumo4g01454 710 SFLD Ferric Reductase Domain 32 687 - -
Pumo4g01454 710 SFLD Ferric reductase subgroup (FRE) 8 687 - -
Pumo4g01454 710 Pfam Ferric reductase like transmembrane component 163 283 IPR013130 -
Pumo4g01454 710 Pfam Ferric reductase NAD binding domain 426 684 IPR013121 GO:0016491
Pumo4g01454 710 CDD NOX_Duox_like_FAD_NADP 320 501 - -
Pumo4g01454 710 SUPERFAMILY Riboflavin synthase domain-like 320 418 IPR017938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01454 Pumo-Chr4 18449348 18453135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01454 183 710 Miscellaneous Gene Families AT5G50160 48.825 7.92e-180 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01454 K00521 - gmx:100816560 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01454 4 18449348 18453135 Pumo4g01454 4 18449348 18453135 ECH