Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01448 ATGATGGGTAATCCAAACCCTAACCCTACACCGGAAGAGGAAAAGAGCCTCCAGGAGGAGCTACTGGGTCCCATCTTACTGGGAGAGCGCGTGATAAAGCTGGCTCAGGAGGCGGAGTCGTCGAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTCCAGGTGGTCTGCGACAACCTGCGCTCGGTGGTGCGCGTGGTGTCGGGGACCCAGTGCGTGAACGAGCGCCCCATCCGCCGCATCGTCGGCGAGGTCTCCAAAAACCTAGAGCGCACGTTAGCGCTGGTCCGCAAGTGCAAGAAGCACGGCGGCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGACTTTCGCAAGGTCTGGAACCTTCTCGAATCTTCCAACGGCGACATGGTGTGGCTCCTCACCATCCTGGACTCCAAAGACGGTACCAATGTCTCCCTCCCCCCCATCGCCAGCAACGACCCCATCCTCGCTTGGGTCTGGACCTTCACCTACACTCTCCAATTGGGCCAGCCCAAAGACCGTGCCGAAGCCGCCACTGAGCTCGGCTCCCTCGCCAGAGACAACGACCGTACAAAATTCATCATCTTGGATGAAGGTGGGGTGCTTCCCCTCCTCAAGCTTCTCAAGGAAGCTTCTTCCCCTGATGCTCAGGTCGCAGCTGCCAATGCTCTTGTTAACATTACCACCAATCAGGATAGGGTTGTTAGTTTCATCGTGGAGTCCCATGCTGTCCCCACCATTGTTCAGGTTCTTGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCTGCTATGGCTGAGCAACATGAACTTGTTCGCGAGGAGTTCGTCAGGGCCAATGTGGCTAGGCCACTTGTGTCCTTGTTGTCCATGGACATGGGTACTGTCCTCACCGACCCCATGGCCGGTCGTGCTAGCATTCATTCACTTGTTCTCAATTTGTCCAATGTTGGAGAGGCCAATTCGGATGGGAGTAGCCGCGGCTCCAGCCACCATCGAAGGGAGAGAGATAGAGAGGTTGAGACCCCGGAGTTGAGGAATGAGGTCAAAATCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTCGAGTTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCTAAGATTATTGAGTCCGAGAGTGGGGAATTACAGCTCAATTGTCTTATGGCTGTCATGGAGATTGCTGCTGTGGCAGAGTCCAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCGCCGGCAGCAAAGGCGGTTTTGGATCAGCTTTTGAGGGTGGTTCAGGAGGAGAGCGATCCGGCATTGCGGATTCCTGCTATTAAGGCACTTGGTTCCTTGGCCAGAAACTTCTCTGGGAAGGTTCCGCAAGTTCTTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTAGCCAGTGAGGCTGCCATTGCTTTGGGGAAGTTTGTGTGCCCGGAGAACTACAACTGTGTTGACCATTCTAAGGCAATACTTGAGCTTGATGGGATTCCTAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTGAAATTACTTTGTTACCTTGCCTTGAATGTAGGTAACAGTAAGGTCCTTGAGCAAGAACGTGCCTTGAATACCCTAGAGAGGTTTGCTCGGCCTGTTCAAGCACAACATCCTGATATGAAGGACCTTTTTGCAAAGGCCATACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1809 0.5312 MMGNPNPNPTPEEEKSLQEELLGPILLGERVIKLAQEAESSKVDCTELARKVQVVCDNLRSVVRVVSGTQCVNERPIRRIVGEVSKNLERTLALVRKCKKHGGVLRQVFSMTTTADFRKVWNLLESSNGDMVWLLTILDSKDGTNVSLPPIASNDPILAWVWTFTYTLQLGQPKDRAEAATELGSLARDNDRTKFIILDEGGVLPLLKLLKEASSPDAQVAAANALVNITTNQDRVVSFIVESHAVPTIVQVLGDSPMRVRVSVANLVSAMAEQHELVREEFVRANVARPLVSLLSMDMGTVLTDPMAGRASIHSLVLNLSNVGEANSDGSSRGSSHHRRERDREVETPELRNEVKISCAKALWKLSKGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKALGSLARNFSGKVPQVLGPLVAQLGNRDVDVASEAAIALGKFVCPENYNCVDHSKAILELDGIPKLMSLLQINDRQQVHGLKLLCYLALNVGNSKVLEQERALNTLERFARPVQAQHPDMKDLFAKAIHHLTLYQPGAQLHRQPLGL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01448 602 Pfam Armadillo/beta-catenin-like repeat 194 230 IPR000225 GO:0005515
Pumo4g01448 602 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 201 234 IPR000225 GO:0005515
Pumo4g01448 602 MobiDBLite consensus disorder prediction 332 350 - -
Pumo4g01448 602 PANTHER ARMADILLO REPEAT ONLY 4 16 590 - -
Pumo4g01448 602 MobiDBLite consensus disorder prediction 326 350 - -
Pumo4g01448 602 Gene3D - 20 136 IPR036537 GO:0007166
Pumo4g01448 602 SUPERFAMILY ARM repeat 172 565 IPR016024 -
Pumo4g01448 602 Gene3D - 336 597 IPR011989 -
Pumo4g01448 602 FunFam Armadillo repeat only 2 333 586 - -
Pumo4g01448 602 Gene3D - 164 332 IPR011989 -
Pumo4g01448 602 SMART arm_5 189 231 IPR000225 GO:0005515
Pumo4g01448 602 SMART arm_5 505 544 IPR000225 GO:0005515
Pumo4g01448 602 SMART arm_5 232 273 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01448 Pumo-Chr4 18387410 18392143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01448 - - gmx:100813824 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01448 4 18387410 18392143 Pumo4g01448 4 18387410 18392143 ECH
Pumo4g01448 4 18387410 18392143 Pumo10g01982 10 26145118 26151482 PCT