Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01436 ATGCCATCAACAGTGAGGGATCACGGGATTGTTCGGAGGATGGCAAGTCTTCCTCGAAGCATAATGGGGGGTATTTCAAGGGCTATGGGGGATGGTATGGGCTTTATAGGAAGAGGAAGAAGAAGAAACCAACACACAAATTTTCCTTTGCAGCCTCAAGATCATGTTCCACAACCACATGGTCAAGACGAATGGAGTTTTCTAGAGAGTTTTGAGCAGCAATATGGCACCAAACATCCATTCTTTTATGCTTGCCGTTTCGCGGAAGCCATGAAGTTGGCAGAGCAAGATCACAAGTTCTTGTTCATGTACCTCCACTCACCTGACCACCCTTTTGCAAACGTTTTCTGCAAGGAAACCCTGTGTTCTGAGCCGGTGATCCAGTTTCTTGATGTGAATTTTGTTTGCTGGGGTGGACTTGCAGATAGAGGAGAGGGTGTGCAAATGGTTGCAACGCTGAGCCCTGCTACCTTTCCCTGTTGTGCTGTCATAGCCCCCGCTCCTGGTGAGAGCATGGCAGTGCTGCAACAGCTAGAGGGACCCCTTTCACCAGCTGAGCTTGTGGGGATTCTACAAAGAACATTGGAAGAACAAGGGGTGGCTTTTGGAGGTGATAGGGCTAAGCAGGAAGAAAAGATCCGAGCAGACCGTAGGCTCAGAGAAGAACAAGACGCAGCATATCTTGCAGCTTTGCAAATTGACAAGGAAAAAGACAAACCCAATAACTTACCTCCACGAGAGAGAGTTCAGAAGCCGGTGGAAGCTCACAACAACAGAAATTATGGGAAATTGATGAACAATTCTATCAATGTCACTAAACAGAACAGCAAAGTGAATGAGTCCAATAAAGAAAAGCGAGACAAGGGAGTTGCAAGTAAAGGAAGCGAGTCTCAGCCTACACAGATACTCATAAGGTTTCCAAACGGTGAAAGAAGAGAGCATACTTTCCTTTACACAGACAAAATCCAGTCCATTTTCTCATACATCGATTCATTAGGTTTGCCAGGGATTGGGAACTATAGATTGATATCAAACTTTCCAAGAAGAGCTTATGGTGCTGATCAAATGAGAATGACTCTCAAAGAGGCTGGCTTGTATCCTAAAGCTAGTGTGTTCCTGGAGCCTTTAGGAACTAGAGTCCCATAA 1146 0.4555 MPSTVRDHGIVRRMASLPRSIMGGISRAMGDGMGFIGRGRRRNQHTNFPLQPQDHVPQPHGQDEWSFLESFEQQYGTKHPFFYACRFAEAMKLAEQDHKFLFMYLHSPDHPFANVFCKETLCSEPVIQFLDVNFVCWGGLADRGEGVQMVATLSPATFPCCAVIAPAPGESMAVLQQLEGPLSPAELVGILQRTLEEQGVAFGGDRAKQEEKIRADRRLREEQDAAYLAALQIDKEKDKPNNLPPRERVQKPVEAHNNRNYGKLMNNSINVTKQNSKVNESNKEKRDKGVASKGSESQPTQILIRFPNGERREHTFLYTDKIQSIFSYIDSLGLPGIGNYRLISNFPRRAYGADQMRMTLKEAGLYPKASVFLEPLGTRVP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01436 381 Gene3D - 294 375 - -
Pumo4g01436 381 SMART 45neu3 66 192 IPR006577 -
Pumo4g01436 381 MobiDBLite consensus disorder prediction 278 292 - -
Pumo4g01436 381 Pfam UBX domain 296 374 IPR001012 GO:0005515
Pumo4g01436 381 SUPERFAMILY Thioredoxin-like 62 199 IPR036249 -
Pumo4g01436 381 MobiDBLite consensus disorder prediction 231 254 - -
Pumo4g01436 381 CDD UBX 302 374 - -
Pumo4g01436 381 Gene3D Glutaredoxin 58 201 - -
Pumo4g01436 381 SMART ubx_3 292 375 IPR001012 GO:0005515
Pumo4g01436 381 MobiDBLite consensus disorder prediction 231 306 - -
Pumo4g01436 381 ProSiteProfiles UBX domain profile. 295 373 IPR001012 GO:0005515
Pumo4g01436 381 PANTHER FAS-ASSOCIATED PROTEIN 9 374 - -
Pumo4g01436 381 CDD UAS 87 197 - -
Pumo4g01436 381 SUPERFAMILY Ubiquitin-like 293 376 IPR029071 -
Pumo4g01436 381 MobiDBLite consensus disorder prediction 260 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01436 Pumo-Chr4 18177228 18179440 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01436 K18726 - gmx:100775212 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01436 4 18177228 18179440 Pumo4g01436 4 18177228 18179440 ECH