Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01424 ATGGCGAACACGAGCGACGCCGGCGTCGAAGCCCTACGGCGGCTGAAAGAGACGAATCCACCGTCGTGGCTCGCGCCGAACCCGGCGCTGTCGGAAGCTTCTCGCACTGCGTCGCAATACTTGTTCTCTTCCCTGAAACCATTTTCCCCAAAATCTCCATTGGACCAACTCCTCGTGGAGGGTTTCGACGCAGAACAGATATGGCAGCAAATCGACCTCCAATCGCAGCCTCTGTTATCCACCCTTCGCCGCCGCGTGAAGCAGCTGGTGGAAAACCCCGAAGAGATTTCCCAGCTGAAGGTTCCTTCGGAGGGTGGGAACAGGAAGGAGGAGAAGAATCGAGACGAGTGGGAAGAAGAGAGTGACGGTTTTGACGAGGAGTTGGATGAGGATGAGGAAGAAGAGGAGGAGGATGAAGAAAAGGAGGGAGCAGAAGAAGATGATGAAGAAGAAGGGATGGAGGATGAAGAGGAAGAGGAGGAGAATGAGGAAGGTGGTGGCATTGAGGATAAATTCTTGAAAATAGATGAATTGACAAAGTACCTAGAGAAGGAGGAAGAGGATTTTGAGAATGGTGAGGCAGACAGAGAAGGTGAGGAGGAAGATGATGATGAAGAGGAAACTGATGAGGATGGTGATTTTGGGATTGATGATGATGAAGACGAAGCGGGGGGCATGGAAAATGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGATCAAAAAGAAAAGCTCAGGTACTTCAGGAATCTGAATATTCTGATGATGAAGATGACATGGAATTTGACAACCAGACGAAAGGGACTGCATCTGCCCATGAAAAGCAACTGGAAAAAATTCAGTCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAGAATAGTGCATTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCTGCTCCTGTAATCACTGAAGAAGTTACAGCTTCAATTGAGGATATGATCAAGAAAAGGATTATTGAGGGGCATTTTAATGATGTTCAAAGGGTTCCTAAATTGCCATCTAAAGCGCCTCGGGAAGTTAAAGAGTTGGATGACAACAAAAGCAAACAGGGTCTTGCAGAAATTTACGAGCAAGAATATGTTCAGAAGACAGATCCCGCTTCTGCTCCGTTGTCATTCAAAGATGAACAAAAGAATGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAACTTTGCTCCAAAACCTGTTATAGAGGATATGTCTATTCAAGCTAATGTGCCTGCTCTGGCAATGGAAGAAATTGCACCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTATTTGATGGCAAGGGTGATATTAAGGAAGAAACAGAGCTTACAAAGGCAGAAAGGAAAAGAAGGAGAGCTAATAAGAAAAGAAAATTTAAAGCTGAGGCAGTAAAAAGGACGAATAAGAAGGCACAAGAAGGTGCAATTCGTAGCCAAGTTAATGGGTAA 1566 0.4559 MANTSDAGVEALRRLKETNPPSWLAPNPALSEASRTASQYLFSSLKPFSPKSPLDQLLVEGFDAEQIWQQIDLQSQPLLSTLRRRVKQLVENPEEISQLKVPSEGGNRKEEKNRDEWEEESDGFDEELDEDEEEEEEDEEKEGAEEDDEEEGMEDEEEEEENEEGGGIEDKFLKIDELTKYLEKEEEDFENGEADREGEEEDDDEEETDEDGDFGIDDDEDEAGGMENARYEDFFGGKKERGSKRKAQVLQESEYSDDEDDMEFDNQTKGTASAHEKQLEKIQSKIEQMEKANIEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDMIKKRIIEGHFNDVQRVPKLPSKAPREVKELDDNKSKQGLAEIYEQEYVQKTDPASAPLSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEETELTKAERKRRRANKKRKFKAEAVKRTNKKAQEGAIRSQVNG 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01424 521 PIRSF snoRNP_Mpp10 193 520 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pumo4g01424 521 PIRSF snoRNP_Mpp10 1 271 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pumo4g01424 521 Coils Coil 272 295 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 167 187 - -
Pumo4g01424 521 Coils Coil 482 502 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 188 226 - -
Pumo4g01424 521 Coils Coil 107 141 - -
Pumo4g01424 521 Coils Coil 175 202 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 117 166 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 232 253 - -
Pumo4g01424 521 Pfam Mpp10 protein 50 504 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pumo4g01424 521 MobiDBLite consensus disorder prediction 488 503 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 481 521 - -
Pumo4g01424 521 MobiDBLite consensus disorder prediction 91 279 - -
Pumo4g01424 521 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 5 511 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Pumo4g01424 521 MobiDBLite consensus disorder prediction 1 30 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01424 K14559 - gmx:100781093 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01424 4 18037523 18043380 Pumo4g01424 4 18037523 18043380 ECH