Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01410 ATGGCCGCGCACGGGTTCAAACCCGAGGTATTGGCGCTTGGCAGGAACGCGTGTTCCTCCGTGATGGCGCAAGCGCGTGCTCATTCCTTTCACGTTTTCGCGCGTGCGGTGGCGCAATTGCGAAACGGCAATGCCAACGTGAAGTTCGCTTGGTACGGTGCGTCCAGTAAGGAAGAGATAGCCGACATCGTCCAACACGGTTTCGGTCATGCTCACAGTAACGGCCTGCGTCTCTCTCCACAAGATTCTCCACTTGAAAGTGTGAAGAGTTCTGCTGTTGACAAAGACGGTTTGAGGCACTTGTTGCTGTGTCGCGTTATCTTGGGGAAGTCGGAGGTGGTGCCACGTGGCTCCAATCAATGCCGTTCGAGTTCTGAAGAGTTTGATTCTGGGGTGGACGATCTTTCGAATCCCAAGGAGTATGTTATTTGGTGTAACCGGATCAACACTCATGTTTTGCCCGAAAATGTTTTGAGTTTCAGACTTCCTTCATTGAAAGGGCATGTGAAAATTGGGGAACCGTTGAGGCCTTCTTCACCGTGGATGTCATTCCCAGCTTTGATTTCGGTGCTTTCGAAGATTTTGCCTCCGCCTGACATTGATTTCATTGCCAAGGTTCACAAGGATTATAGAGAGAAGAGGATTTCTCGACATGAGCTGATTCAGAAAGTGAGAGTAATAGCAGGCGACAAATTGCTACTTTCCGTCATCAAATCTTTCAGAGCCAAGAAAATACCTGCAAGCTTTAAAGCAAACAAGGTGAAAGAATGGCAAGCGGACAGCCAGCAGCGTGAACGGAATGATTGTTCATTTGAGAGTTCTATTAGCTATTACAGGAAGTGA 843 0.4852 MAAHGFKPEVLALGRNACSSVMAQARAHSFHVFARAVAQLRNGNANVKFAWYGASSKEEIADIVQHGFGHAHSNGLRLSPQDSPLESVKSSAVDKDGLRHLLLCRVILGKSEVVPRGSNQCRSSSEEFDSGVDDLSNPKEYVIWCNRINTHVLPENVLSFRLPSLKGHVKIGEPLRPSSPWMSFPALISVLSKILPPPDIDFIAKVHKDYREKRISRHELIQKVRVIAGDKLLLSVIKSFRAKKIPASFKANKVKEWQADSQQRERNDCSFESSISYYRK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01410 280 ProSiteProfiles RST domain profile. 175 246 IPR022003 -
Pumo4g01410 280 SUPERFAMILY ADP-ribosylation 41 161 - -
Pumo4g01410 280 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 7 242 IPR044964 -
Pumo4g01410 280 Gene3D - 7 161 - -
Pumo4g01410 280 ProSiteProfiles PARP catalytic domain profile. 1 178 IPR012317 GO:0003950
Pumo4g01410 280 Pfam RCD1-SRO-TAF4 (RST) plant domain 176 241 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01410 Pumo-Chr4 17892443 17896169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01410 - - gmx:100784311 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01410 4 17892443 17896169 Pumo10g02036 10 27128225 27131341 PCT