Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01407 ATGGCCACCCAATCACCGCCTCCTCCCACTCCCACCGCCACCGCCACCGACGATAACCAAGGTTCTGAAGTTGTGCAAGCAACAAATGTTGATCAGCAAAATGCCAGAGAAGAGCCTGCTAAACAGAGTTCAACTACATCAGTCTTTGTGAACTCACAACCAATGCGGGAAGAACAAGTTCAGAATGCTGTGAAATTTCTATCACACCCAAAAGTTAGAGGTTCACCTGTCATCTATAGGCAATCATTTCTAGAGAAGAAGGGCCTTACGAAGGAGGAGATTGACGAAGCCTTTCGGCGTGTGCCAGATTCAGCTCCAACTGTGCAGACAGCTGGTGTAAATCAAGATGGGCAATTGAAATCGTCATCAAACATTCAGCAACAAGCCCAACAACAAACTTTGCAGCCGGGTTTACCTGCTTCTACTGGTGTTAATACTTCATCGGGAACCTTATCACGCTTCAGATTTCACTGGTCCCATGCCCTTATTGCAGTTGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTATAATAATTAAGAATTCTATTCTCCCTCGGTTAAAATCTTGGATACGTAAGGTTGTCTTAGACAATGATGATGAACAATTAAAGAAAACTGACAACAAACCGACACTGATGGAAGAAGCTGCACAAGCTGCAAAATCAGCTGCAGCTGCAGCTGCAGATGTGGCAAAAGCGAGCCAAGAAATGCTGGCTTCAAAAGGTGAAGAGAGGAGATACTTTGTGGAAGTTGTGAGCCTTTTAGATAAGCAAGTACAAGAAATGAAGTCAATGACAAATGCCATAAGAAGGTTGGAAGGGCAAGAAGATCTTCGAATCACTCAAACAAGTTCAAAGCAACTGATTGTGAATGGCAAAGCGGACTACGACTTGCGTTCAGTGAGATCTTCATCCCCACCTACATCTGTTGAACCACCAAGTGGTCTTCATCCAAAGTCATATGCAGAGATAATGGCTATGGTCCAAGGAGGAGAGAAGCCTTCTAATATTAGGGTGCAAAGCACGTCTACCCAGATGCTTCATTCTCAAGTAAACGGTGAAGACTTGAATAGCAAGGCCCAGGATACCCCTCTATCAAATGGGGATGACCCATTGCCCTGGTGGCAGAGGAAAAATGTCAGAATCAGAGAGATTGATAATGAAAATGAGTCTAATGGAGTATCTTATGCTGCTGCATCCAGTCAGCAGCCAGTTCAACGCGTATGGGTTCCTCCTCAACCTCCCCCCATAGCTATGGCGGAGGCTGCAGAAGCAATCAGACGCCCAAAGCCAGTGGCCCAAAAGGAACAGATATCAGATAATCAGTCAGTAGCTCATTCTTCAGACGTCTCTGATGACGGGCATAGGATCCCAAAACTACTGGAATCTGAAGGTGTAGCAGAGGGCAGCAGTGTCAGCTCAGTTCCCAGCTCTAGTGAGATACAAGAGGAGCATGAAGTCAAATATGATGAAAAATGA 1479 0.4557 MATQSPPPPTPTATATDDNQGSEVVQATNVDQQNAREEPAKQSSTTSVFVNSQPMREEQVQNAVKFLSHPKVRGSPVIYRQSFLEKKGLTKEEIDEAFRRVPDSAPTVQTAGVNQDGQLKSSSNIQQQAQQQTLQPGLPASTGVNTSSGTLSRFRFHWSHALIAVGLLAASGAGTAIIIKNSILPRLKSWIRKVVLDNDDEQLKKTDNKPTLMEEAAQAAKSAAAAAADVAKASQEMLASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLRITQTSSKQLIVNGKADYDLRSVRSSSPPTSVEPPSGLHPKSYAEIMAMVQGGEKPSNIRVQSTSTQMLHSQVNGEDLNSKAQDTPLSNGDDPLPWWQRKNVRIREIDNENESNGVSYAAASSQQPVQRVWVPPQPPPIAMAEAAEAIRRPKPVAQKEQISDNQSVAHSSDVSDDGHRIPKLLESEGVAEGSSVSSVPSSSEIQEEHEVKYDEK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01407 492 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 486 IPR025655 GO:0005515|GO:0005778|GO:0016560
Pumo4g01407 492 MobiDBLite consensus disorder prediction 1 53 - -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 107 144 - -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 339 365 - -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 14 53 - -
Pumo4g01407 492 Coils Coil 255 275 - -
Pumo4g01407 492 Gene3D - 48 110 IPR036388 -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 428 492 - -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 102 144 - -
Pumo4g01407 492 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
Pumo4g01407 492 MobiDBLite consensus disorder prediction 339 372 - -
Pumo4g01407 492 FunFam Peroxisomal membrane protein PEX14 48 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01407 Pumo-Chr4 17847642 17856014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01407 K13343 - gmx:100786361 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01407 4 17847642 17856014 Pumo4g01407 4 17847642 17856014 ECH
Pumo4g01407 4 17847642 17856014 Pumo10g02039 10 27177402 27179357 PCT