Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01396 ATGGTTAACACTGAAGCAATAAGAACTTCCATTGGAGTAATTGGAAATGTCATCTCTTTTTGTTTATTCATGTCTCCAGTACCTACATTTGTATCTATATGGAAATCAAAATCAGTGCAAAATTTCAAGCCAGATCCTTATATTGCAACTATACTCAATTGTGGAATGTGGTCATTCTATGGAATGCCCTTCGTAACTGAAGCTAACACTCTTGTCCTCACAATTAATGCTTTTGGCTTCTTCCTTGAGATCTTCTACACTCTCATGTTCTTTATATACTCAACCTGGAGCAAGAGGAGAAAGATCATCCTAATCTTCCTGGCTGAAATGATCTTCATTGCGTTAGTGGTATTTCTACTCATGAACTTTATGCACTCCCCCAAGCAAAGAAAGGTGATTGTTGGACCTATTTGCATAGTCTTCAACATCCTTATGTACTTTGCACCCTTGACTGTCATGCGACAAGTAATTCGAACGAAGAGTGTGAAGTACATGCCTTTCTTACTTTCGTTCGCCAACTTTGCCAATGGAGTTGTCTGGACGACCTATGCCTTACTTAAGTGGGATCCATTCATTGTGATTCCCAATAGCATTGGAACAGTTTCCGGGTTGGCGCAGCTGGTCCTCTATGCCATGTACTACCGAACAACCAACTGGGATGAAGATATCGATCACGTATGA 681 0.4038 MVNTEAIRTSIGVIGNVISFCLFMSPVPTFVSIWKSKSVQNFKPDPYIATILNCGMWSFYGMPFVTEANTLVLTINAFGFFLEIFYTLMFFIYSTWSKRRKIILIFLAEMIFIALVVFLLMNFMHSPKQRKVIVGPICIVFNILMYFAPLTVMRQVIRTKSVKYMPFLLSFANFANGVVWTTYALLKWDPFIVIPNSIGTVSGLAQLVLYAMYYRTTNWDEDIDHV 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01396 226 Gene3D - 129 218 - -
Pumo4g01396 226 Gene3D - 8 99 - -
Pumo4g01396 226 PANTHER RAG1-ACTIVATING PROTEIN 1 17 217 IPR047664 -
Pumo4g01396 226 FunFam Bidirectional sugar transporter SWEET 9 101 - -
Pumo4g01396 226 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016020
Pumo4g01396 226 Pfam Sugar efflux transporter for intercellular exchange 10 95 IPR004316 GO:0016020
Pumo4g01396 226 FunFam Bidirectional sugar transporter SWEET 130 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01396 Pumo-Chr4 17706305 17708760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01396 1 222 Miscellaneous Gene Families AT5G62850 51.351 6.29e-82 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01396 K15382 - gmx:100810948 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01396 4 17706305 17708760 Pumo4g01396 4 17706305 17708760 ECH