Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01389 ATGCGATCCTCAAGCATTCGCAGCTTCATCATCTTCACCATCTTCCTCATTGCGATCCTCCCCCACGGACACGCAACAACTCCAACCTCCAAATTTCGCCCCAAACCACTGTTTTCTCCCTTCTCAACCGCCCTCGAAACCCTCCAGAAACAACTCGGGTACACCTTCAAGAGCATCCATCTTCTTCGTCGCGCCATGACACACGCTTCCTTCTCCGAAGAAAACAACAAAGCTTTCGCCATTCTGGGCGCTAGCGTCATCGAAACTTCAGTCTCTTTCCATCTGCTCTCCAAAGACGTTGATGTTTCGTCTAAAGAGCTGAACCGTCGATTGTCCCAAATCACCAACGTGGACTCATCCTGCGCCGTCGACGGAACGCGATTAGGGTTGCAGAAGGTGGTTCGCGTCTCGCCCAAGACCAATTCCTCCGCCCCTGCCGTCGTTTGCGGCGCGTTCCGAGCAATCTTTGGCGCTATTGCTATCGACACTGGCAAGTCCGATGATGCAGGTAACGTTTTCTGGAACCTTCATGGCGGTGACCTAGGAGTTGCCGTGCCTCTTTGA 564 0.5319 MRSSSIRSFIIFTIFLIAILPHGHATTPTSKFRPKPLFSPFSTALETLQKQLGYTFKSIHLLRRAMTHASFSEENNKAFAILGASVIETSVSFHLLSKDVDVSSKELNRRLSQITNVDSSCAVDGTRLGLQKVVRVSPKTNSSAPAVVCGAFRAIFGAIAIDTGKSDDAGNVFWNLHGGDLGVAVPL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01389 187 PANTHER RIBONUCLEASE III 30 164 IPR011907 GO:0003723|GO:0004525|GO:0006364
Pumo4g01389 187 SMART riboneu5 60 186 IPR000999 GO:0004525|GO:0006396
Pumo4g01389 187 Gene3D Ribonuclease III domain 43 180 IPR036389 GO:0004525|GO:0006396
Pumo4g01389 187 ProSiteProfiles Ribonuclease III family domain profile. 45 164 IPR000999 GO:0004525|GO:0006396
Pumo4g01389 187 SUPERFAMILY RNase III domain-like 38 172 IPR036389 GO:0004525|GO:0006396
Pumo4g01389 187 CDD RIBOc 61 167 IPR000999 GO:0004525|GO:0006396
Pumo4g01389 187 FunFam Protein NUCLEAR FUSION DEFECTIVE 2 43 179 - -
Pumo4g01389 187 Pfam Ribonuclease-III-like 60 166 IPR000999 GO:0004525|GO:0006396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01389 - - gmx:100527745 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01389 4 17610927 17613902 Pumo4g01389 4 17610927 17613902 ECH