Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01381 ATGGGAGATAACAAACGTAAGAGAGGACGCAAACCCAAAACCCCCGCCCCCGAAACCCTAGACCACCCCGCCACCGCCCCAAACTCCTCCACCACCACCACCACCGCAATGGACGACGTCTTCTCCGTCGGCAACGTCGAGCTCATCGACACCACGGCCTCTCCGCACCTCCGTCGCCTCCGCGGCCGCCCCAAGAAGCTCCCCAACCACTCCGACAAGCCCCACGCTCCGCCCACGGGGCGCCGCCACGCCCGCCCCCTCGACAACGGCGGCGGGGACTTCTCGGTCCCCGGCGACGTCGGGGTGTCCCCCGCGGTAGCGATGGAGGCGGACCCGGCGGTGTGGGAGGCGAGGGTGCTGCCGGCGATGGACTCGGTGGTGAAGGTGTTCTGCGTCCACACGGAGCCGAATTTCTCGCTGCCGTGGCAGAGGAAGAGGCAATACAGCTCGAGTAGCAGCGGGTTTGTCATTGGCGGGAGAAGGGTTCTCACGAATGCGCATTCCGTGGAACACTACACACAGGTCAAGCTCAAAAAACGTGGCTCTGATACCAAGTACTTGGCCACTGTGCTCGCCATTGGAACCGAATGTGACATTGCCATGCTTACAGTTGATGATGATGAGTTCTGGCAAGGGATGTCACCTGTAGAGTTTGGGGAATTGCCCACACTTCAAGACGCAGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATTTCTGTGACCAGTGGTGTTGTATCACGCATTGAGATTCTATCTTATGTCCATGGTTCTACAGAACTTCTAGGTTTACAGATAGATGCTGCTATAAATTCTGGCAATTCTGGTGGACCTGCATTTAATGATAAAGGAAACTGTGTGGGGATTGCATTTCAGTCCCTCAAGCACGAAGATGTGGAGAATATAGGTTATGTCATTCCAACGCCAGTTATCATGCATTTCATCCAGGATTATGAGAAGAATGGAGGATATACTGGATTCCCTATTCTTGGGGTTGAGTGGCAGAAAATGGAAAATCCTGATCTGCGAATTGCAACGGGCATGAAACCTGATCAGAAAGGTGTGCGCATTAGAAGAATTGATCCTACTGCTCCAGAATCTAAGGTTTTGAAGCCATCAGATGTTATCCTTAGTTTTGATGGGGTTGATATTGCCAATGATGGAACAGTTCCATTTCGTCACGGAGAGCGCATTGGTTTCAGTTATCTCATATCACAGAAATATACTGGGGATAATGCAGCAATCAAAGTACTGCGAAATTCAGACATTTTCAAATTTGACATTAAACTTGATAGTCACAGAAGGCTTATTCCAGCACACAGCAAGGGCAAGCCTCCCTCATATTATATTATTGCTGGATTTGTTTTAACAACTGTTTCGGTTCCATATCTTCGTTCCGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTCAAGCTTTTGGATAAACTGCTGCATTCGATGCCACAATCACCGGATGAACAACTTGTTGTGGTCTCTCAGGTGTTGGTGGCTGATATCAACATTGGATATGAAGATATCGTTAACACCCAGGTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTGGCCACTATGGTAGAGAGCTGCAATGATGAATATTTAAAATTTGATCTAGAATATGATCAGATAGTGGTGCTTCGCATGAAGACTGCAAAAGCAGCTACTCTCGATATTCTTGCAACACACTGTATTCCATCAGCGATGTCTGATGATCTTAAGTCATGA 1761 0.4912 MGDNKRKRGRKPKTPAPETLDHPATAPNSSTTTTTAMDDVFSVGNVELIDTTASPHLRRLRGRPKKLPNHSDKPHAPPTGRRHARPLDNGGGDFSVPGDVGVSPAVAMEADPAVWEARVLPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRIATGMKPDQKGVRIRRIDPTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNSDIFKFDIKLDSHRRLIPAHSKGKPPSYYIIAGFVLTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGQPVKNLKSLATMVESCNDEYLKFDLEYDQIVVLRMKTAKAATLDILATHCIPSAMSDDLKS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01381 586 MobiDBLite consensus disorder prediction 23 38 - -
Pumo4g01381 586 FunFam Protease Do-like 9 107 209 - -
Pumo4g01381 586 Pfam Trypsin-like peptidase domain 153 290 - -
Pumo4g01381 586 FunFam protease Do-like 9 211 321 - -
Pumo4g01381 586 Gene3D - 106 209 IPR043504 -
Pumo4g01381 586 SUPERFAMILY PDZ domain-like 354 436 IPR036034 GO:0005515
Pumo4g01381 586 MobiDBLite consensus disorder prediction 67 88 - -
Pumo4g01381 586 Gene3D - 324 436 IPR036034 GO:0005515
Pumo4g01381 586 Pfam PDZ domain 438 583 IPR041517 -
Pumo4g01381 586 MobiDBLite consensus disorder prediction 1 38 - -
Pumo4g01381 586 Gene3D - 437 586 IPR046449 -
Pumo4g01381 586 SUPERFAMILY Trypsin-like serine proteases 117 323 IPR009003 -
Pumo4g01381 586 CDD PDZ_serine_protease 329 429 - -
Pumo4g01381 586 Gene3D - 210 321 IPR043504 -
Pumo4g01381 586 PANTHER - 117 584 - -
Pumo4g01381 586 MobiDBLite consensus disorder prediction 52 98 - -
Pumo4g01381 586 PRINTS HtrA/DegQ protease family signature 182 202 IPR001940 GO:0004252|GO:0006508
Pumo4g01381 586 PRINTS HtrA/DegQ protease family signature 370 382 IPR001940 GO:0004252|GO:0006508
Pumo4g01381 586 PRINTS HtrA/DegQ protease family signature 154 166 IPR001940 GO:0004252|GO:0006508
Pumo4g01381 586 PRINTS HtrA/DegQ protease family signature 261 278 IPR001940 GO:0004252|GO:0006508
Pumo4g01381 586 PRINTS HtrA/DegQ protease family signature 224 248 IPR001940 GO:0004252|GO:0006508
Pumo4g01381 586 Pfam PDZ domain 331 431 IPR001478 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01381 Pumo-Chr4 17524108 17529858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01381 K25897 - gmx:100817187 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01381 4 17524108 17529858 Pumo4g01381 4 17524108 17529858 ECH