LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g01315	ATGGATCGTCAATGGCGTCCTGCTCCTCCACCAATCCAACCCAATGTCTGCCCCACTTGCTTCCTCTCCCACTTCCCCTTTTGCCCTCCCCCACCACCCTATTTTCACCCTCACCCTCTCCCTTACGCCCCCGCCAACCCTAATTTCCCCAACTTCAAGAGACCCCGAATCGACGACAATTTCTCCGACGACGAGCGCAGATTAAAGCTCATTCGCGATCACGGATCCAATCCTCCCCACACTTACGCACCACACCCTAATCAAAACGGCTTCCCTCCCCACGACGCCGTTCCACCGCACCCCTTCCACGCTTATCCAGACCCCTCGCACCGTGTTCCCGACGGTTACCATCACGCTCACACTCCTCATGTTCACGATGGGAACCACCACAAACTCAATGGAAGACTAGGTCACTATCCTTATCCGTACCCTGCGGGTAACAATAGCAACACTTCTTCTGATAACATGGAGGCTTCGAGGTTCTTCAGGGGGCAGCCTCAGCCTCAGCCTCCTCTTCCTTCTTCACCACCGCCACCTCTTCCCATGGAACCCTCCATGAATCAATTGAAAACCTACTTTTCACCGCCCAAGAAACCACCCTCTCTTTTTCCCGTTCCCGTGAGTTCCTCTCCTTCCTCGTTTTCGCAAGTTCCCGAACCTCACTCCATGCCTCAGCCCTATTATCCCACCGCTTTTCCTTCCGAGGAACTGTCGAAGCAGTACTTGGGAGATTCCCAACCTTTTTCGTTAAACCAATTGGCTGCAGAGAGACCTAAAGTCATCGATGCTTCGCAATTATTTTGGCATCCGCATCGAGCTTCGCGGCCTGATCATTTTGTCATCATCTTTCGAGGCCTTCCAGGTAGTGGTAAGAGTTATCTAGCAAAGATGTTGCGTGATCTTGAGGTTGAAAATGGCGGTGATGCTCCACGAATTCATTCTATGGACGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATAGCGAGGCATCAAAATCTTCAAGCTCAGGCAGAAACAAGAAGCCTGTGACAAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCTTTCAAGAAAACTGTCGAGGAAGGAGTTTTCACCTTCATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTACGAAGTTTATATTTTAGAAGCTACATACAAGGACCCGGTGGGTTGTGCTGCAAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCTAAGCAATGGGAAGAAGCTCCGTCCTTGTATCTGCAGCTTGATGTGAAGTCATTATTTCATGGAGATGATCTAAAGGAAAGCAGAATACAGGAGGTTGACATGGATATGGAAGATGATCTGGGTGATGCATTACCTCCAGTTCAAGGAAGAGAAGCTGAGAAAGTTGTTGACCCTCCTGTTGGCGAAGATGCAAGTTTCCTAAAGGCTGGGAAGAGTTGGGATGCTGAAGGGGAACATCCAACAGAAGTCAGGGAATTGGGTAAGAGCAAATGGTCAGAAGATTTCGGTGAAGATGACATTGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATCAGGGTGGCAAGACAGGGTTTTCAATAGGGGCTGCAAGGAAGGTAAATGCATTGTCTTTAGTGATCGGACCTGGTGCTGGATACAACCTGAAATCTAATCCATTACCTGAAGAGGATAGTCCAACCCGTAATAGTGTGGAGTCAAAGCAGCACAGCATATTTCAAGAACGAATCCGGGCTGAGCGAGAATCTTTCAAAGCTGTATTTGATAGGAGGCGACACAGGATTGGCGGACTTGATGTGGAGGATGACTAA	1959	0.4798	MDRQWRPAPPPIQPNVCPTCFLSHFPFCPPPPPYFHPHPLPYAPANPNFPNFKRPRIDDNFSDDERRLKLIRDHGSNPPHTYAPHPNQNGFPPHDAVPPHPFHAYPDPSHRVPDGYHHAHTPHVHDGNHHKLNGRLGHYPYPYPAGNNSNTSSDNMEASRFFRGQPQPQPPLPSSPPPPLPMEPSMNQLKTYFSPPKKPPSLFPVPVSSSPSSFSQVPEPHSMPQPYYPTAFPSEELSKQYLGDSQPFSLNQLAAERPKVIDASQLFWHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSEASKSSSSGRNKKPVTKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPVGCAARNVHGFTQEDIEKMSKQWEEAPSLYLQLDVKSLFHGDDLKESRIQEVDMDMEDDLGDALPPVQGREAEKVVDPPVGEDASFLKAGKSWDAEGEHPTEVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDQGGKTGFSIGAARKVNALSLVIGPGAGYNLKSNPLPEEDSPTRNSVESKQHSIFQERIRAERESFKAVFDRRRHRIGGLDVEDD	652

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	509	531	-	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	600	621	-	-
	Pumo4g01315	652	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	278	451	IPR027417	-
	Pumo4g01315	652	PANTHER	YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP	218	640	IPR026314	GO:0005634
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	115	133	-	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	73	97	-	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	115	188	-	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	144	162	-	-
	Pumo4g01315	652	Gene3D	-	279	445	IPR027417	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	508	531	-	-
	Pumo4g01315	652	MobiDBLite	consensus disorder prediction	166	184	-	-
	Pumo4g01315	652	FunFam	YLP motif-containing protein 1 isoform X3	279	444	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g01315	K17602		-	gmx:100804293	1019.61

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo4g01315	4	16768311	16776581	Pumo4g01315	4	16768311	16776581	ECH