Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01295 ATGGTTGGCGACAACACGAAGAAGTTGAAAGTCTCTGAGAATTTGGAGGACAACATCGACGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAAGAGGTCCAAGACGAGCTCGACAAGATCAATGAGGAGGCCAGTGATAAGGTCCTTGAAGTAGAGCAGAAGTACAATGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGAGATCGTGAAATCTATTCCTGATTTCTGGTTTACTGCTGTGATCATCCCTGCTCTTTGTGAACTTCTGAACGTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTTGATGTTGAAGATAATAAAGATGTTAAATCAGGCTATTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACAAAGACCTTTACCTTCCTTGAAGAAGGAACAACAAAGATAACTGCTACCCCCATAAAATGGAAAGAGGGCAAGGGATTACCCAACGGAGTTGATCATGACAAGAATGGGAACAAGCGGGCTCGTATTGATATCAGTTTCTTTAGTTGGTTTAATGACTGTGAGCAGAAAGATGATATGGATGAAATTCATGATGAGGTTGCAGAATTAATCAAGGACGATTTATGGCCAAATCCACTCACTTATTTCAACAATGACCTTGACGAAGAGGATGTTGATGATGAAGCTGATGATGAGGAAAAGTATGAGGATGACTCTGAAGATGATGACCAAGAGGAGGATGATGCTGAGAGTGAGGATGGCAATCACAGTTGA 774 0.407 MVGDNTKKLKVSENLEDNIDGELVLSIEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNEIVKSIPDFWFTAVIIPALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFLEEGTTKITATPIKWKEGKGLPNGVDHDKNGNKRARIDISFFSWFNDCEQKDDMDEIHDEVAELIKDDLWPNPLTYFNNDLDEEDVDDEADDEEKYEDDSEDDDQEEDDAESEDGNHS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01295 257 Coils Coil 23 54 - -
Pumo4g01295 257 SUPERFAMILY NAP-like 13 217 IPR037231 -
Pumo4g01295 257 MobiDBLite consensus disorder prediction 219 250 - -
Pumo4g01295 257 Pfam Nucleosome assembly protein (NAP) 71 217 IPR002164 GO:0005634|GO:0006334
Pumo4g01295 257 Pfam Nucleosome assembly protein (NAP) 27 71 IPR002164 GO:0005634|GO:0006334
Pumo4g01295 257 MobiDBLite consensus disorder prediction 215 257 - -
Pumo4g01295 257 Gene3D - 3 73 - -
Pumo4g01295 257 Gene3D Nucleosome assembly protein 74 220 - -
Pumo4g01295 257 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 15 233 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01295 Pumo-Chr4 16515082 16518622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01295 K11290 - gmx:100810307 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01295 4 16515082 16518622 Pumo4g01295 4 16515082 16518622 ECH