Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01294 ATGGAATCGGCGGGGGAGTGGCTGGAGAAGGCGCTGGTGGAGTTGTGCTCCAAGATTGAAACAGGCTTGGGTTTAGGTTTGGACCAAGACATCATCAAAGGCCTCGTCTCTTACTGCGACCTTGCCGAGCCACGAGATGCTAAAGAGTACCTTGACAATATAATCGGCCAGGATGCAGGGAAAACTGTGATTGAAGAATATTTACGACGGAGAGGTTACTCAGAATCCAGCACCAACTCAGGTGTTCCAACTACCACATTACATGCGTATGTCAAACCCCCTTCAGTTGAGACATCTGCAAGTGGAACTAAGAAATCATTTAGAACACCAAAAGCAGCATACCGCAGTCAACACGCAGAACCCAACAAGAATGTGATTAGCAGTAATCAGGAAAATCAGACCTCAACAGTAGGTAGTGAATCAAAAACATCGCAAAAGGGTAACCAAGTAAATTCCAAAAAGAAGAAAGCTGGGAAAGCTGTCTCACTTGCTGAGGCTGCCAAAGGGTCAATTGTGTTCCAGCAGGGAAGACCATGCTCTTGTCAAGCACGTCGTCACAGACTGGTCAGCAATTGCTTGTCTTGTGGCAAAATAGTTTGTGAACAAGAAGGAGAGGGGCCTTGCAATTTTTGTGGTGCACTTGTGTTAGGAGAGGGCAGCTCGTATGCTGGTCTGGAAGAAAGTTTGCCTCCCTTGTCAGATGCTGAGGCTGCTGCTGAAGCTTATGCAAAGAGGCTTGTTGATTATGACCGAAACTCCGCAGCTCGTACAACAGTTATTGATGACCAAAGTGACTACTATGAGATTGATGGAAACAGTTGGTTGTCAAAGGAGGAAAAAGAACTGTTAAAGAAGAAACAAGAGGAGATGGAAGAAGCTGAGAAAGCCAAACGGAATAGAGTTGTCGTGACTTTTGATCTAGTTGGCCGCAAGGTCCTTGTGAATAAAGATGAAGCTTCAGAATTACAGTCTGAAAATAGAATATTACGTCCACCGGATGAAAGGGAAGTGAACCGTATCAAACCAAACCCAACTCTTACGTTTCAACCGGTTTTTGTGGACCTGGGCTTGAGTAGGAAATCTGCTAAAGATAAGCAATCACATAAAGGCATAAGCAAGGGCTTGTGCTTGGAGATTACTGGGAGAGTGCAGCATGATCGCAATGACCAGAAGTATTTTATGATGGAAAGCCAATTGGCAACAGCTTCAAATGAAAATGTTTGGCAAGTATCTTCAGGAAATGGAGTGCACGTTGAAGATGATGGTGAATGTTTACTGAACTATGATAAGTAA 1293 0.4439 MESAGEWLEKALVELCSKIETGLGLGLDQDIIKGLVSYCDLAEPRDAKEYLDNIIGQDAGKTVIEEYLRRRGYSESSTNSGVPTTTLHAYVKPPSVETSASGTKKSFRTPKAAYRSQHAEPNKNVISSNQENQTSTVGSESKTSQKGNQVNSKKKKAGKAVSLAEAAKGSIVFQQGRPCSCQARRHRLVSNCLSCGKIVCEQEGEGPCNFCGALVLGEGSSYAGLEESLPPLSDAEAAAEAYAKRLVDYDRNSAARTTVIDDQSDYYEIDGNSWLSKEEKELLKKKQEEMEEAEKAKRNRVVVTFDLVGRKVLVNKDEASELQSENRILRPPDEREVNRIKPNPTLTFQPVFVDLGLSRKSAKDKQSHKGISKGLCLEITGRVQHDRNDQKYFMMESQLATASNENVWQVSSGNGVHVEDDGECLLNYDK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01294 430 MobiDBLite consensus disorder prediction 72 157 - -
Pumo4g01294 430 Pfam Putative zinc finger motif, C2HC5-type 177 216 IPR009349 GO:0005634|GO:0006355|GO:0008270
Pumo4g01294 430 MobiDBLite consensus disorder prediction 120 151 - -
Pumo4g01294 430 Coils Coil 276 300 - -
Pumo4g01294 430 PANTHER THYROID RECEPTOR INTERACTING PROTEIN RELATED 6 404 IPR039128 -
Pumo4g01294 430 Coils Coil 232 252 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01294 K23398 - gmx:100810833 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01294 4 16508594 16511041 Pumo4g01294 4 16508594 16511041 ECH