Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01281 ATGGACTTCAATCTCGCATTAGTTATTGTATTAACCACCATTTTGGGAATTGGGCTTGAAGGATGCGATAGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCGGATGTTGGAAATAACATGCATCTCTCTAGAAGTCTTGCTCAGGCAAGCTTGCCTTGGTATGGTATAGACATGGGTAACGGGTTACCTAATGGAAGGTTCACTAATGGTCGCACAGTTGCTGACATAATAGGTGACAATATGGGCCTCCCTAGGCCTCCTGCATTCCTGGACTCATCTGTAAATGAAGAAGTTATACTAGAAAACGGTGTGAACTATGCTTCTGGTGGTGGGGGCATCTTGAATGAAACTGGCGCCTATTTTATCCAAAGGTTTTCTCTGGACAAACAAATTGAGCTGTTTCAGGGGACACAAAAGTTAATTAGAGGCAAAATTGGAAATAGGGCCGCGTACAAGTTTTTCAAGGAAGCTAATTTTGTTGTTGCTTTAGGGAGCAATGACTTCATCAACAACTACTTGATGCCTGCTTACACTGATTCATGGACATACAATGATGAAACCTTCATGGACTACTTAATAGGAACATTGGAAAGACAACTAAAGCTACTTCATAGTTTAGGAGCAAGAAAACTGGTGGTTTTTGGGTTGGGTCCAATGGGTTGCATTCCCCTTCAAAGGGTGCTTACTACAACTGGGAATTGTCGAGAAAAGGCAAACCAGCTGGCTCTTACCTTCAACAAAGCTGCAAGCAAGTTAGTTGATGACTTGGCAAACCCTTTTCCTGATTCAAGCTATAAATTTGGAGATGCATATGATGTTGTTTATGATGTGATTAGCAATCCATATAAGTATGGATTCCAAAATGCAGACTCGCCCTGTTGTTCCTTTTGGAATATTCGACCCGCCCTTACATGTGTACCTGCATCAAGTCTGTGCAAAGATAGAAGCAAATATGTCTTTTGGGATGAGTACCACCCCACAGACAGTGCTAATGAGCTAATTGCAAATGAACTCATCAAGAAATTTGGACTTTCAAATACTGATCAAGGGGGTGCACCTTCACCAGCACCTGCTGTTGCTCCATCTCCTGAAGACTAA 1104 0.4212 MDFNLALVIVLTTILGIGLEGCDSKVVQFIFGDSLSDVGNNMHLSRSLAQASLPWYGIDMGNGLPNGRFTNGRTVADIIGDNMGLPRPPAFLDSSVNEEVILENGVNYASGGGGILNETGAYFIQRFSLDKQIELFQGTQKLIRGKIGNRAAYKFFKEANFVVALGSNDFINNYLMPAYTDSWTYNDETFMDYLIGTLERQLKLLHSLGARKLVVFGLGPMGCIPLQRVLTTTGNCREKANQLALTFNKAASKLVDDLANPFPDSSYKFGDAYDVVYDVISNPYKYGFQNADSPCCSFWNIRPALTCVPASSLCKDRSKYVFWDEYHPTDSANELIANELIKKFGLSNTDQGGAPSPAPAVAPSPED 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01281 367 MobiDBLite consensus disorder prediction 347 367 - -
Pumo4g01281 367 Gene3D SGNH hydrolase 27 345 IPR036514 -
Pumo4g01281 367 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
Pumo4g01281 367 CDD SGNH_plant_lipase_like 29 343 IPR035669 -
Pumo4g01281 367 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 28 343 - -
Pumo4g01281 367 SUPERFAMILY SGNH hydrolase 30 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01281 Pumo-Chr4 16348839 16351068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01281 29 340 Acyl Lipid Metabolism Gene Families AT4G10950 32.484 8.46e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01281 - - gmx:100815129 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01281 4 16348839 16351068 Pumo4g01281 4 16348839 16351068 ECH