Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01278 ATGAGAGGTGCTTCTGCTACCGCTACTGGTTCGAGTAGCAGAGAAGAAAGGAGAAGAAAAGCGAGGTCGGCGTCACCATTGAAGGACCGATCCAAAACCTCTTCATCTAAGTTAACATCTTCTTCTTCTTCATCCAAACGAAGCAGCTCACCCTCTGCCACTCTTCTCGACGTCGATGACGACGTCACCTCGCTCTTTCACGATTACCCTAGCCCTAACCCTAACCCTCGGAGCTTCCCTCACAGCGTTAAGCAGAAATGTTGGGAAAAGGCCGACAAGGTCAAAGGACGAGACCCCGATCGCTGGCGCAGGGACGCCCTCGGCAACACTGTCTTTCGCAAGCTCGTAGGTTGCCCCGGTTGTCTTTGTCACGACTACGACCACATTATCCCTTTTTCTAAGGGTGGAGAAAGCACGCTGGAAAATTGTCAAGTATTACAGGCAACAGTTAATCGTTCAAAGGGTAATCGAACAGAGATCTCCAAAGCTGAACTTATTCAGAAGAGTTCTTATTGCAGGGTTTCAGGTCGTGATATGGATCTTCTGGAACTGTCTGCCTATGGCAATGTCCGGCGTGGACCAGATTCTGGGGGCTGTAGAATTCAATGA 609 0.4975 MRGASATATGSSSREERRRKARSASPLKDRSKTSSSKLTSSSSSSKRSSSPSATLLDVDDDVTSLFHDYPSPNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHIIPFSKGGESTLENCQVLQATVNRSKGNRTEISKAELIQKSSYCRVSGRDMDLLELSAYGNVRRGPDSGGCRIQ 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01278 202 SMART HNH_5 107 152 IPR003615 -
Pumo4g01278 202 MobiDBLite consensus disorder prediction 28 55 - -
Pumo4g01278 202 CDD HNHc 111 155 IPR003615 -
Pumo4g01278 202 MobiDBLite consensus disorder prediction 65 84 - -
Pumo4g01278 202 Pfam HNH endonuclease 124 157 IPR002711 GO:0003676|GO:0004519|GO:0008270
Pumo4g01278 202 Gene3D - 82 175 - -
Pumo4g01278 202 MobiDBLite consensus disorder prediction 1 55 - -
Pumo4g01278 202 PANTHER HNH ENDONUCLEASE 17 202 - -
Pumo4g01278 202 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01278 Pumo-Chr4 16315105 16317766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01278 - - gmx:100500174 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01278 4 16315105 16317766 Pumo4g01278 4 16315105 16317766 ECH