Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01273 ATGGCTGCAACTTCTTCCTTGTGTTCATCCACCCTCCAATCCCAAATCAATGGATTCTACCTTCACAAAACCTCTCTTTCTCATCCTCGTTCCCTCACTTTCTCCAGGAGGAAAATTTCAACCACAGTGAAGGCTACATCTCGTGTTGACAAGTTTTCAAAAAGCGATATCATTGTTTCTCCATCCATTCTTTCTGCTAACTTTGCAAAATTGGGAGAGCAGGTGAAAGCAGTGGAGTTGGCTGGTTGTGATTGGATTCATGTTGATGTAATGGATGGTCGCTTTGTTCCAAATATTACAATTGGACCTCTTGTGGTTGATGCATTGCGCCCTGTGACAGATCTTCCTTTGGATGTACACCTGATGATTGTTGAGCCTGAACAAAGGGTACCAGACTTTATTAAGGCAGGAGCTGATATAGTCAGTGTTCATTGTGAACAATCTCCACCATCCATTTGCATCGCACAGTTAATCAAGTGA 480 0.4271 MAATSSLCSSTLQSQINGFYLHKTSLSHPRSLTFSRRKISTTVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSPPSICIAQLIK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01273 159 CDD RPE 58 159 IPR000056 GO:0005975|GO:0016857
Pumo4g01273 159 SUPERFAMILY Ribulose-phoshate binding barrel 51 150 IPR011060 -
Pumo4g01273 159 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 86 100 IPR000056 GO:0005975|GO:0016857
Pumo4g01273 159 Pfam Ribulose-phosphate 3 epimerase family 59 158 IPR000056 GO:0005975|GO:0016857
Pumo4g01273 159 Gene3D Aldolase class I 47 159 IPR013785 -
Pumo4g01273 159 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 57 148 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01273 Pumo-Chr4 16216371 16221132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01273 K01783 - gmx:100786514 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01273 4 16216371 16221132 Pumo4g01273 4 16216371 16221132 ECH