Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01270 ATGGGTCCTCCCTGTCCCGTTGAAGACCGATCCGAAATAGTGTTCTTCGATGTGGAGACCAGCGTTCCCACCCGAACGAGGCAGGGTTTTGCGATTCTCGAATTCGGAGCCATATTGGTTTGCCCCAGGACGCTCACGGAGCTCCGCAATTACTCCACTCTCGTCCGACCTGCCGACCTCTCCGTCATCTCGCCCTTGTCGGAGCGATGCAACGGCATCAACGCCAACGCCGTCGCCGCCGCGCCGACTTTCGCCGACATTGCTCACTTCGTTTACGACCTTCTTCACGGGAGGATTTGGGCGGGGCATAATATCATAAGATTCGACTGTGTTCGGATTAGAGATGCGTTTGCGGAGATTAATCAGCCACCACCTGAACCTAAGGGTACCATTGACTCGCTGGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGGCTTGGACGCCAGACACATAGGAGCTTGGATGATGTTCGGATGAATCTCGAAGTCCTCAAATACTGTGCAACAGTTCTATTCTTGGAGTCAAGTCTCCCAGATATATTCACTGCAAATAGTTGGGTTTCACCAAATGCTACTACAAGAAGCCGCGGTAATGGGAAATCTCCATCACAGGGGGGCTTATTAAATATTAATAAAGATTCTGTATTATCATCTCCTGCAACTGAATCCAAAGACAAAAATCATCCAATACTTTCTTTTGCAATGAGCAGCCCAAAAGGGAATGTCCCGAATATTGCAGATCCTAATATAGTTCAGTCGAATCCTTTTGACTTGAGCGCTCTTGAGGCTGAAATAAAAAGAGAATCCATTAAGTCAGATGTTGCCATGGAGGAAAAACCCATGCAAGAGTCACCTGATTTGGCTTCCTCATCTTCTGTATCTCTGCCTTGCAGCAGCTCTATTGCTGTTTTAGAACCTGATGTAATATGTATCCCTTCTATTGATGCATCTCTTGTGCCATCTTTTCGTGGCAGTCAAAGGATAGAATTACTGCATGAAGGTTTCCCATTTCAGCTTCATTGTACCTATTTGAAAGTGCGGTTTGGAATAAACACAAAGTTTTTTGATAATGCTGGCCGGCCACGATTGAGTTTTGTGGTTGACCCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACCGTGTAGCACAGAAGTTAACCGTGGATTCTGGTAGCAGCTCTGATTGGAGGCCTGTTGTTATTAGGAAAGAAGGCTTCTTCAACTATCCTACTGTCAGATTGCACATACCTACAGCAGTAGTGGCAGACGTTGCTATTTATGCCACGGAAATATATCAAAGAGAATCATCTGGAACAGTGCAAAGACTTCTCTTCAGCAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGGACATTTGTTGATGCCTTCTTCTCCTTAGATCCTTATGATTATCAGCAGAATGCAGGGATTAAATTAGTTGCCAAAAAATTGATCATTCATAGCAAATAG 1521 0.4504 MGPPCPVEDRSEIVFFDVETSVPTRTRQGFAILEFGAILVCPRTLTELRNYSTLVRPADLSVISPLSERCNGINANAVAAAPTFADIAHFVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPNATTRSRGNGKSPSQGGLLNINKDSVLSSPATESKDKNHPILSFAMSSPKGNVPNIADPNIVQSNPFDLSALEAEIKRESIKSDVAMEEKPMQESPDLASSSSVSLPCSSSIAVLEPDVICIPSIDASLVPSFRGSQRIELLHEGFPFQLHCTYLKVRFGINTKFFDNAGRPRLSFVVDPSPSLCNVLDACDRVAQKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVADVAIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAFFSLDPYDYQQNAGIKLVAKKLIIHSK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01270 506 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 11 495 - -
Pumo4g01270 506 FunFam Exonuclease family protein 6 184 - -
Pumo4g01270 506 Pfam Exonuclease 14 177 IPR013520 -
Pumo4g01270 506 MobiDBLite consensus disorder prediction 201 224 - -
Pumo4g01270 506 SMART exoiiiendus 12 186 IPR013520 -
Pumo4g01270 506 Coils Coil 271 291 - -
Pumo4g01270 506 CDD DEDDh 14 178 - -
Pumo4g01270 506 SUPERFAMILY Ribonuclease H-like 12 182 IPR012337 -
Pumo4g01270 506 Gene3D - 8 184 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01270 Pumo-Chr4 16175597 16179028 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01270 - - gmx:100788659 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01270 4 16175597 16179028 Pumo4g01270 4 16175597 16179028 ECH