Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01243 ATGGTGAAGATCTGTGGAATTGGAGCCGGGTACGTAGGGGGTCCTACAATGGCTGTGATTGCCCTCAAATGTCCCTCAATTGAAGTGGCAGTGGTTGACATCTCACACTCTCGCATATCAGCTTGGAACAGCAACAAACTCCCCATTTACGAGCCTGGCCTAGAAGAAGTGGTGAATCAGTGCAGAGGAAAGAACCTCCTCTTCAGCACCGATGTGGAAAAGCATGTGCACGAGGCAGACATAATCTTTGTTTCAGTGAACACCCCAACAAAAGTCAGAGGACTTGGAGCTGGCAAGGCTGCAGACTTGACCTATTGGGAGAGTGCAGCTAGGATGATAGCTGATGTTTCCAAGTCAAACAAGATTGTTGTTGAGAAATCCACTGTCCCAGTTAGAACAGCTGAGGCAATTGAGAAAATCCTAACCCACAATACTAATAGCAAGGGCATCAAGTATCAGATTTTGTCAAATCCTGAGTTTCTCTCTGAGGGTACTGCCATTCAGGACCTTCTAAACCCTGACCGGGTTCTAATTGGAGGAAACCAAGACCCTGAAGGTCTAGAAGCAATTCAAAAACTGGAGGCTATATATGCACATTGGGTGCCTGAAGATAGAATCATAACAACCAATTTGTGGTCAGCAGAACTCTCCAAGTTGGCTGACAATGCCTTTTTGGCACAAAGGATTTCATCTATCAATGCTATGTCAGCTCTATGTGAGGCCACTGGGGCTGAAGTTTCACAAGTTTCTCATGCTCTCAGCAAAAACACCAAAATTGGGCCCAAGTTCCTTAATGCTAGTGTTGGCTTTGGTGGCTCTTGTTTTCAAAAGGACATACTCAACTTGGTGTACATATGTGAGAGCAATGGCCTCACTGAAGTGGCAAATTACTGGAAACAAGTGATCAATGTGAATGACTACCAAAAGAGTAGGTTTGTGAACAGGGTTGTGACCTCAATGTTCAACACGGTTTCGGGTAAGAAGATTGCAATTCTGGGGTTTGCCTTCAAGAAAGACACTAGTGACACAAGGAAAACTCCTGCAATTGATGTTTGCAAAGGCCTTTTGGGAGATAATGCATGCTTGAGCATTTATGATCCGCGAGTTACTGAGGAGCAGATTCAAAAGGATTTGTCATTGGATGGTGTTGAATGGGACCATCCAATCCACCTGCAGAAGCCAATGAGTTCCAGTGTTGTGAAACAGGTTAGTGTTGTTGGGGATGCTTATGAGGCAACTAAAGATGCTCATGGGATATGCATTCTTACAGAGTGGGATGAGTTCAGGACCATTGATTATCAAAGAGTGTATGACAGCATGCAGAAACCAGCATTTGTGTTTGATGGTAGAAACATACTGAATGTTGACAAGTTGAGGGAGATTGGATTCATTGTGTACTCAATTGGGAGGCCATTAGAGCAATGGCTAAAGAACATGCCCCAACAGGCTTGA 1452 0.4442 MVKICGIGAGYVGGPTMAVIALKCPSIEVAVVDISHSRISAWNSNKLPIYEPGLEEVVNQCRGKNLLFSTDVEKHVHEADIIFVSVNTPTKVRGLGAGKAADLTYWESAARMIADVSKSNKIVVEKSTVPVRTAEAIEKILTHNTNSKGIKYQILSNPEFLSEGTAIQDLLNPDRVLIGGNQDPEGLEAIQKLEAIYAHWVPEDRIITTNLWSAELSKLADNAFLAQRISSINAMSALCEATGAEVSQVSHALSKNTKIGPKFLNASVGFGGSCFQKDILNLVYICESNGLTEVANYWKQVINVNDYQKSRFVNRVVTSMFNTVSGKKIAILGFAFKKDTSDTRKTPAIDVCKGLLGDNACLSIYDPRVTEEQIQKDLSLDGVEWDHPIHLQKPMSSSVVKQVSVVGDAYEATKDAHGICILTEWDEFRTIDYQRVYDSMQKPAFVFDGRNILNVDKLREIGFIVYSIGRPLEQWLKNMPQQA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01243 483 Gene3D - 211 242 - -
Pumo4g01243 483 Gene3D - 243 482 - -
Pumo4g01243 483 FunFam UDP-glucose 6-dehydrogenase 1 210 - -
Pumo4g01243 483 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 212 311 IPR008927 -
Pumo4g01243 483 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 474 IPR028356 GO:0003979
Pumo4g01243 483 Gene3D - 1 210 - -
Pumo4g01243 483 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 216 IPR036291 -
Pumo4g01243 483 FunFam UDP-glucose 6-dehydrogenase 211 242 - -
Pumo4g01243 483 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 188 IPR001732 GO:0016616|GO:0051287
Pumo4g01243 483 PIRSF UDPglc_GDPman_dh 2 470 IPR017476 GO:0016616
Pumo4g01243 483 SMART UDPG_MGDP_dh_C_a_2_a 330 455 IPR014027 GO:0016616|GO:0051287
Pumo4g01243 483 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 454 IPR014027 GO:0016616|GO:0051287
Pumo4g01243 483 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 212 306 IPR014026 GO:0016616|GO:0051287
Pumo4g01243 483 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 317 466 IPR036220 -
Pumo4g01243 483 PIRSF UDPglc_DH_euk 1 482 IPR028356 GO:0003979
Pumo4g01243 483 NCBIfam nucleotide sugar dehydrogenase 3 451 IPR017476 GO:0016616
Pumo4g01243 483 FunFam UDP-glucose 6-dehydrogenase 243 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01243 Pumo-Chr4 15923176 15925640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01243 K00012 - gmx:100781197 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01243 4 15923176 15925640 Pumo4g01243 4 15923176 15925640 ECH