Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01235 ATGGAGCGTGAGAGTGAGGAGAGTAAGAAAAGCAGTGTCAACGGTCAACGCCGTGTGGGTTTACTATATGATGAAAGAATGTGTAAGCACCACATACCGGACGACGAGGACCATCCCGAGACTCCTAATCGCATCACGGCTATTTGCAGCAAACTCCAAAGCGCCAAAATTCCCCAACGATGCGTGATTTTGGAAGCTAAAGAAGCTCAAGACAAACATCTACTGTTAGTGCATTCCGAAAATCATGTAAATCTCATTAAGAACATCAGCTCAAACCAATTCGATTCGCAGAGGTGTGAGATTGCCTCTAAATTGAGTTATATATATTTTAACAAAGGTTCATCAGAAGCTGCGTACCTTGCTGCAGGCTCTTCTGTAGAGGTTGTTAAAAGAGTGGCAAGCAAGGAATTGGATTCTGCTGTTGCCATTGTTAGGCCTCCGGGTCATCATGCAGAACATGATGAAGCTATGGGATTTTGTCTCTTCAATAATGTGGCAATTGCTGCAAGATATCTCTTAGATGAAAGACCAGAATTAGGTGTGAAGAAAATTTTAATTGTTGATTGGGACATCCATCATGGAAATGGTACTCAAAAAACGTTCTGGAACGATTCTCGAGTTTTATTCTTCTCCGTTCACAGGCATGAGTTTGGGAATTTTTATCCAGCTAATGATGATGGATTTTATACCAAGATTGGAGAAGGAGCAGGTGCTGGATATAATATAAATGTCCCATGGGAGAATGGGGGATGTGGTGATGCAGATTACTTTGCAGTGTGGGACCACATCTTGCTTCCTGTTGCCAAAGAATTTAATCCAGACATAGTTATTGTTTCTGCTGGATTTGATGCAGCTGTTGATGACCCTCTGGGAGGATGTTGTGTCACACCATTTGGTTATTCTGTTCTGTTGGAAAAGTTGATGAATTTTGCTGAAGGTAGGATAGTGCTGATTTTAGAAGGAGGATATAATCTTGATTCCATTGCAAAATCAATGCATGCTTGTTTGGAGGTTTTGCTAGAAGACAAACCTGTTGTTGGTTCCTCAGAGACCTATCCATTTGAGTCTACATGGCGAGTAATTCAAGCGGTTCGCCAGGAGTTAAGTCCCTTTTGGCCTATACTTACCTCTGAATTACCACAAAAGTTAATCTCTCAAATGGCACCACTAGCGCATATTCTTATCTCGAGCTCTGGCTCTGAGGTTGAGGATGATAAGGGTGCACTAAGTTCAGAAAATCTTGGAGGACTTCTTGAGGATGTCGTAAAACCACTTTCGGTGCTGAAAGTTGATACCGGTAACCAGGATCCCAAGATAGCCTTTTAA 1326 0.4201 MERESEESKKSSVNGQRRVGLLYDERMCKHHIPDDEDHPETPNRITAICSKLQSAKIPQRCVILEAKEAQDKHLLLVHSENHVNLIKNISSNQFDSQRCEIASKLSYIYFNKGSSEAAYLAAGSSVEVVKRVASKELDSAVAIVRPPGHHAEHDEAMGFCLFNNVAIAARYLLDERPELGVKKILIVDWDIHHGNGTQKTFWNDSRVLFFSVHRHEFGNFYPANDDGFYTKIGEGAGAGYNINVPWENGGCGDADYFAVWDHILLPVAKEFNPDIVIVSAGFDAAVDDPLGGCCVTPFGYSVLLEKLMNFAEGRIVLILEGGYNLDSIAKSMHACLEVLLEDKPVVGSSETYPFESTWRVIQAVRQELSPFWPILTSELPQKLISQMAPLAHILISSSGSEVEDDKGALSSENLGGLLEDVVKPLSVLKVDTGNQDPKIAF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01235 441 PANTHER HISTONE DEACETYLASE 9-RELATED 17 385 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Pumo4g01235 441 SUPERFAMILY Arginase/deacetylase 17 373 IPR023696 -
Pumo4g01235 441 Pfam Histone deacetylase domain 38 338 IPR023801 -
Pumo4g01235 441 FunFam Histone deacetylase 15 12 390 - -
Pumo4g01235 441 PRINTS Histone deacetylase superfamily signature 146 169 IPR000286 -
Pumo4g01235 441 PRINTS Histone deacetylase superfamily signature 273 283 IPR000286 -
Pumo4g01235 441 Gene3D Histone deacetylase domain 11 389 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01235 Pumo-Chr4 15638970 15643547 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01235 K11406 - gmx:100788831 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01235 4 15638970 15643547 Pumo4g01235 4 15638970 15643547 ECH