Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01221 ATGGCTTCCTTACCCAGTTTTGCTCCTTTTGTATTTCTATTGCTTGTTATTGGGTGCAATGCAAGGCCATTTTATCCACTTCCCAGCAAAGGTGATGGTGGAAGTAGGAAACCCTTACAAACTTTTCGCCCGTATAACATTGCTCATCGCGGTTCAAATGGAGAGCTTCCTGAAGCAACTCATGCTGCATACATGAGAGCTATTGAGGAAGGTGCAGACTTCATTGAAACTGATATCTTAGCATCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATGATACTACTGACATTGCAAATCACACACAGTTTGCTAATCGGAAAAGAACATATGAAGTCCAAGGGGAAAACATCACTGGCTTTTTTACTGTTGATTTCACATTAGAGGAATTAAAGTCATTGAGGGTGAAACAGAGGTTTAAGTTCAGGGACCAACAGTTTAATGGAAAGTTTCAAATCATCACTTTTGAAGAGTTTATTACCATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTATTTATGAACCAACGTGTTCAATGGTCACATGGCAAAAGATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGGTACAAGGGTTCCTACCTGTCAAAAGATTGGTTGAGACAACCTGTATTTATTCAGTCATTTGCTCCAACTTCACTCATGTATATATCAAATAAAACGGACTTGCCCAAGCTTTTCTTAATTGATGATGTTACTATTCCAACGCAAGACACTAATCAGTCATATTGGGAGATTACATCTGATGAATACCTAGACTACATAAAGCAATATGTTGTCGGAATTGGACCTTGGAAGGACACAGTGGTACCTGTGGTAAATAATTATATGAAAACTCCTACTAACCTTGTTGCCAGGGCACATACTCTTAACCTGCAGGTGCATCCATATACTTACCGAAATGAGTTCCAGTTTTTGCACTTCAACTTCAGTCAAGATCCGTATATGGAGTATGATTACTGGATCAACAAGATAGGCGTTGATGGTCTCTTTACAGACTTCACTGGTAGTCTTCATCGTTTTCAGGAATGGACCTCTAACCATCATGATGATGATGATGGCAACGATGAGACTGCATCCAAGCTATTGCATAAAATTGCTTTGTTGGTCTCCTCTTATAAATGA 1185 0.3916 MASLPSFAPFVFLLLVIGCNARPFYPLPSKGDGGSRKPLQTFRPYNIAHRGSNGELPEATHAAYMRAIEEGADFIETDILASKDGVLICFHDVTLDDTTDIANHTQFANRKRTYEVQGENITGFFTVDFTLEELKSLRVKQRFKFRDQQFNGKFQIITFEEFITIALDAPRVVGIYPEIKNPVFMNQRVQWSHGKRFEDKFVETLQKYGYKGSYLSKDWLRQPVFIQSFAPTSLMYISNKTDLPKLFLIDDVTIPTQDTNQSYWEITSDEYLDYIKQYVVGIGPWKDTVVPVVNNYMKTPTNLVARAHTLNLQVHPYTYRNEFQFLHFNFSQDPYMEYDYWINKIGVDGLFTDFTGSLHRFQEWTSNHHDDDDGNDETASKLLHKIALLVSSYK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01221 394 CDD GDPD_ScGlpQ1_like 44 355 - -
Pumo4g01221 394 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 40 371 - -
Pumo4g01221 394 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Pumo4g01221 394 FunFam Glycerophosphodiester phosphodiesterase GDPD5 42 361 - -
Pumo4g01221 394 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Pumo4g01221 394 SUPERFAMILY PLC-like phosphodiesterases 44 360 IPR017946 GO:0006629|GO:0008081
Pumo4g01221 394 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01221 16 366 Acyl Lipid Metabolism Gene Families AT5G08030 77.778 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01221 K01126 - gmx:100778145 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01221 4 15565631 15569570 Pumo4g01221 4 15565631 15569570 ECH