Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01201 ATGGGAAGACCACGTTTTAGGTTGTGCATTGGTCGCGCCACGCCTCGTGTTCGAGCCTGTTCTGCATCTAGTTTTCGGTCCAAGTCCCCCTCCTCCTCTGCTTCTATCAAATATGCAAACAGGACTGAGTTTTCAAGCAACGGAGGGCACGACCCTGGCAGAGATAACGGGGCTGAAACGGGCAATAAGATAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGGGCTCTTGAATGGGCACTCTCTCACACTGTTCAGAGCCAGGACACTGTTGTTCTTGTTCATGTAGCCAGACCCACCAGGGAAGGTACGGAATCTGGTGCGAAGTTTAATGTGAAGGCATATCAACTTCTCCTCGATATGAAAAGCATGTGCGAAACGAAGAGACCAGGGGTGGTAGTGAATGTAGTGATGCTTGAAGGAGAGGAAAAGGGTGTTGCTATAGTGGAAGAGGCAAAGCAACAGAGGGTGTCATTATTGGTAGTGGGACAAAGAAAGCGATCCATCTTGTGGTGCATCATGAGGCAGGTGGGTACGAAAGGGAACAAGACCTGGGGTCGTTGA 567 0.4956 MGRPRFRLCIGRATPRVRACSASSFRSKSPSSSASIKYANRTEFSSNGGHDPGRDNGAETGNKIMVVVDSSFEAKGALEWALSHTVQSQDTVVLVHVARPTREGTESGAKFNVKAYQLLLDMKSMCETKRPGVVVNVVMLEGEEKGVAIVEEAKQQRVSLLVVGQRKRSILWCIMRQVGTKGNKTWGR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01201 188 CDD USP_Like 63 171 - -
Pumo4g01201 188 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 7 183 - -
Pumo4g01201 188 MobiDBLite consensus disorder prediction 21 60 - -
Pumo4g01201 188 Gene3D HUPs 50 177 IPR014729 -
Pumo4g01201 188 Pfam Universal stress protein family 63 169 IPR006016 -
Pumo4g01201 188 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 62 171 - -
Pumo4g01201 188 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01201 Pumo-Chr4 15279682 15281020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01201 53 169 Receptor kinase-like Gene Family AT1G17540 25.620 3.45e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01201 - - gmx:100527308 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01201 4 15279682 15281020 Pumo4g01201 4 15279682 15281020 ECH