Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01199 ATGGGTTGGGCCATAGCTCTACACGGCGGCGCCGGCGACATCCCGCTCTCACTAGCACCGGAGCGCCGGCAGCCGCGCGAGGAAGCCCTCCGGCACTGCCTACAAATCGGCGTGGAAGCTCTCAAAGCCAAACTGCCTCCTCTCGACGTGGTTGAACTTGTCGTTCGGGAGTTGGAGAACATTCCGCAGTTTAACGCGGGGAAGGGATCTGTGCTGACTTCCAAAGGCACCGTTGAAATGGAAGCTTCCATCATGGACGGCACCACTATGAATTGCGGAGCTGTTTCTGGCCTCACTACGGTCGTCAACGCCATCTCTTTAGCTCGATTGGTGATGGAGAAGACGCCTCACATCTATCTCGCTTTTGATGGAGCAGAGGAATTTGCAAGACAACAAGGCGTTGAGACTGTCGATTCAACCCATTTTATTACTCCAGAAAATATTGAAAGGCTAAACCAGGCCAAAGAAGCCAATAGGGTCCAGATTGATTATACTCAACCTATCCAAAATGATGCTAAGAAAGAGACGCCATTGGTTAATGGTGATAGTCAAATCGGGACTGTTGGGTGTGTGGCTGTTGATGGTCAAGGGAATTTGGCTTCTGCAACATCTACTGGTGGATTAGTGAACAAAATGGTGGGTCGAATTGGTGACACACCAGTCATTGGTGCTGGGACCTATGCCGATGCACGTTGTGCGGTTTCAGCGACAGGCAAAGGTGAAGCAATAATACGTGGGACAGTGGCAAGAGATGTGGCTGCTCTGATGGAGTTTAAGGGTCTTTCTCTCGAGGAAGCTGCTAATTGTGTTGTACATGAGCGCACACCAAAAGACACTGTTGGTTTGGTTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCCGAGCATGTGCTACCGAAGATGGGTATTCTGAGATTGCAATATGGCCTGCTGCCAAAATTGAGTGA 969 0.5005 MGWAIALHGGAGDIPLSLAPERRQPREEALRHCLQIGVEALKAKLPPLDVVELVVRELENIPQFNAGKGSVLTSKGTVEMEASIMDGTTMNCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEEFARQQGVETVDSTHFITPENIERLNQAKEANRVQIDYTQPIQNDAKKETPLVNGDSQIGTVGCVAVDGQGNLASATSTGGLVNKMVGRIGDTPVIGAGTYADARCAVSATGKGEAIIRGTVARDVAALMEFKGLSLEEAANCVVHERTPKDTVGLVAVSAKGEVAMPFNTTGMFRACATEDGYSEIAIWPAAKIE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01199 322 FunFam Isoaspartyl peptidase/L-asparaginase 187 318 - -
Pumo4g01199 322 CDD Asparaginase_2 4 309 - -
Pumo4g01199 322 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Pumo4g01199 322 Gene3D (Glycosyl)asparaginase 187 319 - -
Pumo4g01199 322 PANTHER L-ASPARAGINASE 3 303 IPR000246 GO:0016787
Pumo4g01199 322 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 316 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01199 Pumo-Chr4 15268681 15270970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01199 5 294 Miscellaneous Gene Families AT4G00590 24.771 1.30e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01199 K13051 - gmx:100799400 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01199 4 15268681 15270970 Pumo4g01199 4 15268681 15270970 ECH