Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01194 ATGGAGCTGTGGAACAGAGCCCGAAGCTTTGCTGAAGAAGCAGCGAAACGATCTCAGGAACTGTCGTTGGGAGCTAGAGCTACCAAATTGAGCGACATCATAGCAGAAACCACCAAAGAAATCGCAGCGCAAGCTTCCAAGCACTTGCCCCAACCTTCTATCAGAAACGACGTCGATCTCGAGCGTTTCGGCATCACCGAAGAGCTCAGGGACTTCGTCAAAGGGATCACCATAACTACCTTTGAGGATTTTCCCCTTCAAGATGATACGGAATTGTCTGATGTTCCTGCGGTTTCAAATGTTAGGCAGGATCTAACCGAGTGGCAGGAAAAACATGCCGGTCTTGTTCTTTCTACAGTAAAGGAAATTTCAAGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCACATTGCACCCTATGAGAATAAGTACATGGAAGACGATAAACTAAAATCATCTGAACAAGTAAAAGATCACAAAGTGGTGATGGAACCCTTAAACACTGAATTGATCTCCAATCGAGAGGTGCAGGAAGTGAAAAAAGAGACCAAATCTTCAAATTCATCAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGAAGGAAACAGTGATGATGAGTCCGATGATGGTGATGGGGGATATGATGATGATTTGGACAAACTGATAGATAATTCGGATGATGAGAAAGGGAAATCATAG 747 0.427 MELWNRARSFAEEAAKRSQELSLGARATKLSDIIAETTKEIAAQASKHLPQPSIRNDVDLERFGITEELRDFVKGITITTFEDFPLQDDTELSDVPAVSNVRQDLTEWQEKHAGLVLSTVKEISRLRYELCPRVMKERKFWRIYFILVNNHIAPYENKYMEDDKLKSSEQVKDHKVVMEPLNTELISNREVQEVKKETKSSNSSTEQDLDVFLLGEGNSDDESDDGDGGYDDDLDKLIDNSDDEKGKS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01194 248 PANTHER BSD DOMAIN-CONTAINING PROTEIN 20 234 - -
Pumo4g01194 248 SUPERFAMILY BSD domain-like 64 156 IPR035925 -
Pumo4g01194 248 Gene3D BSD domain 80 163 IPR035925 -
Pumo4g01194 248 MobiDBLite consensus disorder prediction 215 232 - -
Pumo4g01194 248 ProSiteProfiles BSD domain profile. 100 152 IPR005607 -
Pumo4g01194 248 MobiDBLite consensus disorder prediction 188 248 - -
Pumo4g01194 248 SMART wurzfinal6 100 152 IPR005607 -
Pumo4g01194 248 MobiDBLite consensus disorder prediction 233 248 - -
Pumo4g01194 248 MobiDBLite consensus disorder prediction 189 203 - -
Pumo4g01194 248 Pfam BSD domain 107 152 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01194 Pumo-Chr4 15212408 15217619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01194 3 223 EF-hand Containing Proteins AT1G69030 39.721 2.98e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01194 - - gmx:100527562 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01194 4 15212408 15217619 Pumo4g01194 4 15212408 15217619 ECH