Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01172 ATGATCACTATCTCTGCAACTTTTATGATATTCTTCTTGTGTTCGCCATCAGTGGCTATCTTAATCACAAGGTTACCGCTACCGTCACCACTAACAGGCCCTGAGTCCGTAGCATTTGACCGAACCGGTGGAGGGCCATATGTTGGTGTTTCTGATGGAAGAATTCTCAAATATGCTGGTCCAAACGGGGGCTTCAAGGAATATGCTTTCACTTCACCAAACAGGAACAAGACAATCTGTGATGGGCTTGCTGATTTCTCAGAACTCCAAGCACAATGTGGGAGGCCTTTAGGATTACGTTTCAACCATCAAACAAACGAACTATATGTAGCGGATGCTTATTCTGGACTTATCAAGATTGGGCCCAATGGAGGGGCTCCAACCCAATGCTTTAAAGGTTTACAACCACAACAAGAGAATGAGAACACTACTACTTTTCAGTTTCTGGATGGCTTGGACTTAGACGTCAACACTGGAATCGTTTATTTCACCCAAGCTAGTGCTAACTACCGTTTCAAGGATAGTCAGACACTACAAAGCAGCAGAGACCAATCTGGGAGCCTATTTTCATTGGACCCAAAAACAAACCAAACAAGAGTGTTGATGAGGGGTCTTGCATTGGCATCTGGGGTGGCAGTAAGCAGAGACGGGTCATTTGTGCTTGTTAGTGAATACTTGGCAAACAGAATTCAAAGATTCTGGCTCAGAGGGCCAAGGGCAAATTCGTCAGAACTATTCTTGCAACTTACGGGAAGACCAGACAACATTAGGAGCAATCAGAGAGGTCAATTTTGGGTGGCAGTGAACGGTGTTTTGGGACCAAATCCACCTCCAAGGCCTACTATTTTATCTGGAGGACTCAGAATTAGCGAGAACGGTATAATCTTACAGATTGTGTCTCTTGTCCAAGAGTTTGGTAATGAGGCAGCAAGTGAGGTTCATGAGCATAACGGGACACTCTACTCTGGCTCCTTGCAGGCTTCCTATGTTCCCATTTCTGCTATGATCTAG 1011 0.4491 MITISATFMIFFLCSPSVAILITRLPLPSPLTGPESVAFDRTGGGPYVGVSDGRILKYAGPNGGFKEYAFTSPNRNKTICDGLADFSELQAQCGRPLGLRFNHQTNELYVADAYSGLIKIGPNGGAPTQCFKGLQPQQENENTTTFQFLDGLDLDVNTGIVYFTQASANYRFKDSQTLQSSRDQSGSLFSLDPKTNQTRVLMRGLALASGVAVSRDGSFVLVSEYLANRIQRFWLRGPRANSSELFLQLTGRPDNIRSNQRGQFWVAVNGVLGPNPPPRPTILSGGLRISENGIILQIVSLVQEFGNEAASEVHEHNGTLYSGSLQASYVPISAMI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01172 336 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 325 - -
Pumo4g01172 336 Gene3D - 16 335 IPR011042 -
Pumo4g01172 336 Pfam Strictosidine synthase-like, N-terminal 22 57 - -
Pumo4g01172 336 Pfam Strictosidine synthase 150 237 IPR018119 GO:0009058|GO:0016844
Pumo4g01172 336 SUPERFAMILY Calcium-dependent phosphotriesterase 23 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01172 Pumo-Chr4 14956929 14958240 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01172 - - gmx:100812289 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01172 4 14956929 14958240 Pumo4g01172 4 14956929 14958240 ECH