Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01169 ATGTTCCGCATAAGCAACACCGTGGTCGGCGCCCTCAACGTCCTGTCCCTGCTGCTGGGAATCGCCGCCGTGGGGTCCTCCGCGTACATCCACATCCGCGGCGGCTCCGACTGCCAGAAGGTGCTGCAGGTGCCGCTCCTGGTGGGCGGCATGTTCGTGGTCCTTGTCTCCGCCTTGGGAATCGTGGGGTCGCTGTGCCGCGTCAACGCCGCGCTCTACGCCTACCTCTTGGTGACGTTCATGCTGATCGTGGGACTCGCCTTCTTCACCGTGTTCGCGCTCTTCGTGACGAACAGGAAGGTGGGGCAGCAGGTTTCCGGCAAGGGCTACGGCGAGTACAGGGTGGCGGACTTCTCGCACTGGCTGCAGCGCTACGTGGTCAACAACAAGAACTGGGACGAGGTCAAGAGTTGTTTGATGGATGCGCACGTGTGCCAGAACCTCGCCCTCAACGGTGGCCGCAACAACGACTCTCTCATTTTCAAACACTTATCTACAACCCAGTCTGGGTGCTGTAAGCCACCGGTGTATTGTGGATTCATAATGAAGAATGCTACGTTCTGGGAAGTGCCAAAGAGGGGTCCAGCTGGAGCGAATAATTCAGACTGCAGCACTTGGAACAATAGGCAGGACAAACTGTGCTACGATTGCAATTCATGCAAAGGAGGAGTGCTGGCCAACATAAGGAACCAGTGGAGACGTCTCACCATATTCAACGCATGTGTGCTTGTGCTTGTCACCGCCATTTACGCCTTGGGCTGCTACGCCATCAAGAACAACAGATCCGACTCCCACTGCAACCACCGCAAAACACCACCATGCCCTTGA 828 0.57 MFRISNTVVGALNVLSLLLGIAAVGSSAYIHIRGGSDCQKVLQVPLLVGGMFVVLVSALGIVGSLCRVNAALYAYLLVTFMLIVGLAFFTVFALFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLALNGGRNNDSLIFKHLSTTQSGCCKPPVYCGFIMKNATFWEVPKRGPAGANNSDCSTWNNRQDKLCYDCNSCKGGVLANIRNQWRRLTIFNACVLVLVTAIYALGCYAIKNNRSDSHCNHRKTPPCP 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01169 275 PANTHER TETRASPANIN-8-RELATED 3 263 IPR044991 GO:0009734|GO:0016020
Pumo4g01169 275 Pfam Tetraspanin family 6 251 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01169 Pumo-Chr4 14936904 14938469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01169 1 262 Miscellaneous Gene Families AT1G18520 47.566 8.65e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01169 - - gmx:100815322 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01169 4 14936904 14938469 Pumo4g01169 4 14936904 14938469 ECH