Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01153 ATGCTACAAAACCCAAGAGTATTGCGATCTTCCGCTCAACCATTCAATGCTCCATCTCGCACCAAAGCACCATCACTTTCGCCATTCCAATTAATACCCACTTCTCCATCTTTTCCAATCCTCAAACAGCAATGCAGATTATCACGTAGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTACTACTATTGGGTTCTCAGGCAGTGGATGGATCCAGAGCAAGAGCAGAAGAAGATGTTGCTAACACAAGTAACAGTGGTCAACCAGAAGAGAATAATCTGGCATTAGCAGAAGATGTTGCTAACACAAGCAACAGTGACCAACCAGAAGAGAATTTGACTTTGGCAGAAGAAGATGTTGGTAACACAAGTAACAGTGATCAACCAGAAGAGAATCTGACTTTAGCAGAAGATGTTGGTAACACAAGTAACAGTGATAAATCAGAAGAGAATGTGGCTACCACTCCCATCTGCATTGAAAGAAAACCTACCAAACTAGTATTCTTAGACATATCTATTGATGGTGAACCTGTTGGTCGCATTACTATAGGGCTCTATGGAGATGATGTCGCTGCAGGAGTTGATAGGTTTAGTAAGATTGCAAGTGGAGCTGCTGGCATTAGCTACAGAAGAAAGGAGTTTGTCAAAATCATGCCCAATTACATCCAACATGGTGGCCTGAGATCCTATGGGGTGGATGCTGAATTTGCTACGAAGACAGGTAGCAACTTGGGAGCCGGTAGTCTTGTTCAGGAATGGGAGAGGGAGTATGAGAGATGTCCTGGGACTAAAAACGTGGCTGGAAGTGTAGGCATTATTGTGAGAAACCCATCAAAACCACCTCCCAAGTTGAAGCTGGTTGCGAAACAAGGGAAGCTGGAGATTGATCAAGAAGAAGTAGGAACTGATCCCAATGGGACAGAATTTGTCATTGCTACAAAGGATTCACCAGAACTGGATGCGTCGACTCTGGTAATCGGAAGAGTAATAGCAGGGATGGAGGTTGTCCGAAGGATCGGTCTGGTTAAAACTGTACAAGAGAATACAGGATCTCCATATTTTAGGGTAGCAAAGCTGATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGCGGTATAATGGACTAA 1167 0.437 MLQNPRVLRSSAQPFNAPSRTKAPSLSPFQLIPTSPSFPILKQQCRLSRRELTIFSNSCLLLLLGSQAVDGSRARAEEDVANTSNSGQPEENNLALAEDVANTSNSDQPEENLTLAEEDVGNTSNSDQPEENLTLAEDVGNTSNSDKSEENVATTPICIERKPTKLVFLDISIDGEPVGRITIGLYGDDVAAGVDRFSKIASGAAGISYRRKEFVKIMPNYIQHGGLRSYGVDAEFATKTGSNLGAGSLVQEWEREYERCPGTKNVAGSVGIIVRNPSKPPPKLKLVAKQGKLEIDQEEVGTDPNGTEFVIATKDSPELDASTLVIGRVIAGMEVVRRIGLVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGIMD 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01153 388 Gene3D - 157 388 IPR029000 -
Pumo4g01153 388 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 388 IPR044185 -
Pumo4g01153 388 FunFam Peptidyl-prolyl cis-trans isomerase B 157 388 - -
Pumo4g01153 388 SUPERFAMILY Cyclophilin-like 163 387 IPR029000 -
Pumo4g01153 388 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 168 386 IPR002130 GO:0000413|GO:0003755
Pumo4g01153 388 MobiDBLite consensus disorder prediction 1 30 - -
Pumo4g01153 388 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 169 346 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01153 Pumo-Chr4 14777356 14778844 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01153 K03768 - gmx:100800469 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01153 4 14777356 14778844 Pumo4g01153 4 14777356 14778844 ECH