Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01147 ATGGCGGACCACTACCCAAGCCCGGCCCAAGCCCACAGAACCACCGCCCCACCCTCCCTCTCCGCCGCGTTTCTCCGAAAACTCCAAGACCGGGCCCCCAACTCAACCCAGCTCGCCGGCATCCTAACCCTTCTCGTAACCGCCTCCATCTTGCTCCTCCTCACCGTCGCAGGGGCCGTCTTGGGCCTCATATTTTTCCTCCCTCTCATCATCGTGTCCAGCCCCGTGTGGGTCCCAGCTGGCACGCTCTTATTCATCGCCACCGCAGGGTTCTTGTCCGTGTGCGGATTCGGCGTTGCACTCGTGGCCGCGCTGTCGTGGATGTACCGTTACTTCAGGGGGCTCCACCCGCCCGGTTCCGACCGTGTCGACTACGCGCGGAGCCGGATTTACGACACTGCCAGCCACGTCAAAGACTACGCCAGAGAATACGGTGGCTATTTGCAGAGTAAGGTCAAAGATGCAGCTCCCGGCGCGTGA 480 0.6229 MADHYPSPAQAHRTTAPPSLSAAFLRKLQDRAPNSTQLAGILTLLVTASILLLLTVAGAVLGLIFFLPLIIVSSPVWVPAGTLLFIATAGFLSVCGFGVALVAALSWMYRYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01147 159 PANTHER OLEOSIN 31 154 IPR000136 GO:0012511|GO:0016020
Pumo4g01147 159 Pfam Oleosin 37 145 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01147 Pumo-Chr4 14741818 14742297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01147 2 159 Lipid Metabolism Gene Families AT3G18570 53.416 3.10e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01147 - - gmx:100809872 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01147 4 14741818 14742297 Pumo4g01147 4 14741818 14742297 ECH