Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01141 ATGGCGAAGCCTCGCAAGCCCAAGAACAACGAAGACCCTAAGCCCGAAAACTCCGGCGCCCTAGTTCACCACCAAAAGCTATGCCTCTCCATCGACATCGATAAACGCCAAGTCCACGGGTATACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGTTTGCACGCGGAGAATTTAGGGATTGGGAGTGTTTGGGTTGACGGTGAGCCCACGGAGTTCGAGTATTACCCGCACCATCAGCAGCAGGTGGAGGATGAGAAGAGATATAGCTCGGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCGCTCTCGAGAAGGAACTGGTTCCCAATTTACTCATTAATTGCTGCAAACCTGCCAAGGCTGAAAGTGAACAACAACAGCAGGAGCAACCCGCTTCTGAGAACGGGTTTCACAACCCGTCCGAACCCAAGCAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAGAAGGCAGAGACAGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACTGTAGCACACAATCTTGTGGCTGTCAGTACAGGAAGCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACATATGTGTTCGCTGCCTAATCTGTCAAAGATGCGGAATACAGTGGATTTTTTCCACAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGATTTCCCATTTGACTCATATACGCAAGTTTTCATAGAGCCGGAGATGGCAGTGTCATCATTGAGTTTAGGAGCCTCTATGAGTATTTTTAGTTCTCAAATTTTGTTTGATGAGAAGGTTATTGACCAGACTATAGATACAAGGGTAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGTGTGTATATCACTCCCGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGTTTCTTGACAGATTTTTTTATTAAGAAACATTTGGGAAATAATGAGGCAAGGTACAGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGTAAAGATTTATATGGAACTCAGTGCATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCAGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCCGAGTCTTTCCGTAGAATTTTGCAAACTATAGTTTCTCGTGCTCAAGATAAAACACGTTCCATAAAGACTCTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGGAATCTTGAACGTCCATTTCTTAAAGATTTTTTTCCTAGGTGGGTCGGTTCTTGTGGATGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAAAGAAAGAATATGGCTGAATTGGCTGTGTTGCGGGGATGTACTGCATTGCAGACTTCAAGTACATCCATTCTTGATATTAATCCAGACACAGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTACCAATGGCTGGGGAAGCATGGCAACTTTTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAGAAAGGTTTAAAACTTGATGGCTCTGATGATAATGGTGACGTGCCTTCCATGGATATGCGTTCGAATACTGAGTCCCCTTTATTATGGATCAGAGCAGATCCCGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCGGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCTCAAGCAATTGCAGCACTTGAAGCATCCCCACAGCTATCATTTTCTATTGTAAATGCCCTAAACAATTTTCTCAGTGACTCCAAGGCTTTTTGGAGAGTACGGATTGAAGCAGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATTTAGTTAAATTTTACAAGAGTCGAAGGTTTGATCCTGACATTGGACTGCCCAAGCCAAATGATTTTCATGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCTATGGTTAGAGCTGCTGACAAGAAAAGCCCAAGAGAGGCTATTGAGTTTGTTTTACAGCTATTGAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTCTTCTGGCTTGCTGCATTGGTCCAGTCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTCTTATTGTCATCACTCCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAAGCTACAATGGAATATTGACTATCAGTTGTATACGGACGTTGACCCAGATTGCATTAAAGCTTTCGGGGTTCATTCCTCTTGATCGAGTTTATGAACTTGTAAAGCCTTTTCGGGACTTAAAGGCATTGTGGCAAGTTCGAATTGAAGCAAGTAGAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCACGGATTCAGCGTTGCTTTTATTTATCAAATACATAGAGGGGGAGCATTCCTTAAGAGGTTGTAAATCTTTTCCCCGAGAGAGGATCTATAGAAGATGTGTGGCAAACTAA 2838 0.4292 MAKPRKPKNNEDPKPENSGALVHHQKLCLSIDIDKRQVHGYTELEIAVPEIGIVGLHAENLGIGSVWVDGEPTEFEYYPHHQQQVEDEKRYSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPAKAESEQQQQEQPASENGFHNPSEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCSLPNLSKMRNTVDFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQILFDEKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMAELAVLRGCTALQTSSTSILDINPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKALWQVRIEASRALLDLEFHCKGTDSALLLFIKYIEGEHSLRGCKSFPRERIYRRCVAN 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01141 945 CDD M1_like_TAF2 24 509 - -
Pumo4g01141 945 MobiDBLite consensus disorder prediction 132 151 - -
Pumo4g01141 945 FunFam Transcription initiation factor TFIID subunit 262 513 - -
Pumo4g01141 945 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 276 518 - -
Pumo4g01141 945 Gene3D Neutral Protease Domain 2 265 513 IPR027268 -
Pumo4g01141 945 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 255 IPR042097 -
Pumo4g01141 945 Gene3D tricorn interacting facor f3 domain 21 254 IPR042097 -
Pumo4g01141 945 Gene3D - 655 926 IPR011989 -
Pumo4g01141 945 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 929 IPR037813 GO:0005669
Pumo4g01141 945 Pfam Peptidase family M1 domain 285 481 IPR014782 GO:0008237|GO:0008270
Pumo4g01141 945 FunFam Transcription initiation factor TFIID subunit 2 109 254 - -
Pumo4g01141 945 SUPERFAMILY ARM repeat 448 907 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01141 K03128 - gmx:100792795 1779.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01141 4 14680512 14694312 Pumo4g01141 4 14680512 14694312 ECH