Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01134 ATGGGTAGTGGTTGTGGAGCTCTTGAAACGAACCGTTTTATAAATGGGGAAGCCGAGAACAGTCTTCACAAGCAAGCTTCTCAAGCTCCTGCTGCATGCGACAACTCGCTTTCTGATGCCAATGATGCAGTTGCTGACTCTGATGCTGATGTTCCTGCAAAGAGGGCCAGGCTGCAGAAGGAGCAGAAGGAATTGACCTTTCAGGACATGTATCAAAATGATGGCGTGTTTGACGATGACGATGAAGATGATAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTTCTGCAAAAATTGTACTATGGTTAACCTTGATCACGATGACTGTTGCTATATATGTGGGGAGCATAGGGATTCTAAAATCCTCAGCCATGGGTTTTTTGCATCTCCTTTGGGCCAAGATGAGGATCTGACTGAAGTCCAGGGAAATGTAAAAGGACTGAAAGATGTTGGCTCACAGGAATCAGTGGCAAATAGTTCTACAGCAATTGGCTTTGATGAGAGAATGTTGTTACATGCAGAAGTTGAAAAGAAATCATCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCCAGTCTTGCTAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTGCTAGAGAAATCACACCAGAAGAACTTGTTACGGTTCATTCTTTGGAGCATATTGAATCTGTGGAAGTTACAACCGAATCACTTTCTAGTTATTTCACTTCTGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTAGCATCAGCAATTGTTTCTGGGCAAGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCCGTGGCAGCATTGGCAGCTCAAGCTGCAGGGGCTAGGAAGGTGCTAATTTTGGATTGGGATGTTCATCATGGAAATGGGACGCAGGAAATATTTGAACAAAACAAATCGGTCTTGTATATATCATTGCATAGACATGAGGGAGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGGTTGGTAGTATGGGCGCAGAAGGATACTGTGTCAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTATATTTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTAATCCAGATTTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACATATGACACATATGTTGAATGCCTTTTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCGTCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGATTGCAAACTGTTCTGGAAGTCCTCAAAATTCAGATGAACTTTTGGCCTTCCTTGGGTCCCATTTTTGTGAATTTGGAGTCACAATGGAGGATGTATTGTTTTGAAAAAAAAAGGAAACAGATTAAGAAACGACGCCGAGTTCTGGTTCCAATGTGGAAGTGGGGACGAAAAAGTTTGTTATTCCATTTTCTGAACGGCCACCTTAATGTAAAATCAAAGTAA 1716 0.4307 MGSGCGALETNRFINGEAENSLHKQASQAPAACDNSLSDANDAVADSDADVPAKRARLQKEQKELTFQDMYQNDGVFDDDDEDDSDWEPFQLHKCVEFEIKKWFCKNCTMVNLDHDDCCYICGEHRDSKILSHGFFASPLGQDEDLTEVQGNVKGLKDVGSQESVANSSTAIGFDERMLLHAEVEKKSSPHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELVTVHSLEHIESVEVTTESLSSYFTSDTYANQHSALAARLAAGLCADLASAIVSGQAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNAFSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPSLGPIFVNLESQWRMYCFEKKRKQIKKRRRVLVPMWKWGRKSLLFHFLNGHLNVKSK 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01134 571 ProSitePatterns Zinc finger RanBP2-type signature. 103 122 IPR001876 -
Pumo4g01134 571 PANTHER HISTONE DEACETYLASE 9-RELATED 88 518 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Pumo4g01134 571 PRINTS Histone deacetylase superfamily signature 293 316 IPR000286 -
Pumo4g01134 571 PRINTS Histone deacetylase superfamily signature 326 341 IPR000286 -
Pumo4g01134 571 PRINTS Histone deacetylase superfamily signature 414 424 IPR000286 -
Pumo4g01134 571 FunFam Histone deacetylase 15 163 535 - -
Pumo4g01134 571 Pfam Histone deacetylase domain 191 479 IPR023801 -
Pumo4g01134 571 SUPERFAMILY Arginase/deacetylase 167 513 IPR023696 -
Pumo4g01134 571 Gene3D Histone deacetylase domain 167 519 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01134 Pumo-Chr4 14586211 14598171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01134 - - gmx:100804724 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01134 4 14586211 14598171 Pumo4g01134 4 14586211 14598171 ECH