Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01103 ATGGGAGTGGAGAACGCCTCTAACTCCATTTCTACCTCAGAATGCGACGACGAACACAGCAACAACAAAATCAACACGCTTGTGCTCTTGAATGTCTACGATCTCACCCCAGTCAATAATTACGTCTACTGGTTTGGATTTGGCATCTTTCACTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGACTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGTCAAGGAAATGCCCTGGATTCATATATAGATGTTCCATCACTTTGGGTCAAACCAATATGAGTCCTTCTGAGTTCCGTACATTTATTGAAAACATGGCTTCCGAGTATCATGGGGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGACGATCTCTCTTATAGATTGACTGGGAAGCAAATCCCTGGTTGGGTGAATCGGCTTGCTAAGCTAGGTGCGTTGTGCAGCTGTCTACTTCCTGAAAGTCTTCAAGTAACTAATGTTAAACAGCTACCTGAATACCATGAATGCTCGGAAGATGAATTTGTCGAATCTCTTTCACCTGCCACACCCCGTGAGTCAACAGAAATAGATGATGAGCAAGAAAAGCACCTTCTTTCACCATCAGCTAGAACTGAGGATGTTACATTCGTTAAAGAGACCCAAGTAAAATAA 675 0.4267 MGVENASNSISTSECDDEHSNNKINTLVLLNVYDLTPVNNYVYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVESRKCPGFIYRCSITLGQTNMSPSEFRTFIENMASEYHGDTYHLITKNCNHFTDDLSYRLTGKQIPGWVNRLAKLGALCSCLLPESLQVTNVKQLPEYHECSEDEFVESLSPATPRESTEIDDEQEKHLLSPSARTEDVTFVKETQVK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01103 224 ProSiteProfiles PPPDE domain profile. 26 163 IPR008580 GO:0008233
Pumo4g01103 224 Gene3D PPPDE domains 21 178 IPR042266 -
Pumo4g01103 224 SMART DUF862_2a 26 164 IPR008580 GO:0008233
Pumo4g01103 224 MobiDBLite consensus disorder prediction 193 209 - -
Pumo4g01103 224 MobiDBLite consensus disorder prediction 182 211 - -
Pumo4g01103 224 PANTHER DESUMOYLATING ISOPEPTIDASE 26 196 IPR008580 GO:0008233
Pumo4g01103 224 Pfam PPPDE putative peptidase domain 28 160 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01103 Pumo-Chr4 14092941 14097823 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01103 - K22763 gmx:100778961 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01103 4 14092941 14097823 Pumo4g01103 4 14092941 14097823 ECH
Pumo4g01103 4 14092941 14097823 Pumo10g02359 10 34505079 34509204 PCT