Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00594 ATGGCCACCGATCGTTTGACCCGTGTTCACAGTCTCCGTGAGAGGCTTGATGAAACCCTCACTGCCAACAGGAACGAAATTTTGGCCCTTCTGTCAAGGATCGAAGCCAAGGGCAAGGGGATCCTGCAACACCATCAGGTCATTGCTGAGTTTGAGGAAATCCCTGAGGAGAACAGACAGAAGCTCACTGATGGAGCCTTTGGAGAAGTTTTGAGATCTACACAGGAAGCCATAGTTTTGCCACCATGGGTTGCTCTGGCTGTTCGTCCAAGGCCTGGTGTGTGGGAGTACCTGAGAGTGAATGTGCACGCTCTTGTTGTTGAGAATTTGCAACCTGCTGAGTACCTGCACTTCAAGGAAGAACTTGTTGATGGAAGTTCTAATGGCAACTTTGTGCTTGAGTTGGACTTTGAACCATTCACTGCATCCTTCCCTCGCCCAACTCTTAACAAGTCAATTGGAAATGGTGTGCAATTCCTCAACCGCCACCTTTCTGCCAAACTCTTCCACGACAAGGAGAGCTTGCACCCACTTTTGGAATTCCTCAGGCTTCACAGCGTCAAGGGAAAGACTTTGATGTTGAACGACAGAATTCAAAACCCAGATGCTCTCCAACATGTTCTGAGGAAAGCTGAGGAATATCTGGGCACAGTGCCTCCTGAGACTCCCTACTCAGAATTTGAGCACAAGTTCCAGGAGATTGGTTTGGAGAGAGGGTGGGGTGACACCGCAGAGCGTGTCCTTGAGTCAATTCAACTTCTCTTGGATCTTCTCGAGGCCCCTGACCCGTGCACCCTTGAGACTTTCCTTGGAAGAATCCCTATGGTCTTTAATGTTGTCATTCTTTCTCCCCATGGTTACTTTGCCCAAGATAATGTGTTGGGATACCCTGACACTGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAGAATGAGATGCTCCATCGCATTAAGCAACAAGGATTGGACATTGTTCCTCGTATTCTCATTATCACCCGTCTTCTCCCCGATGCAGTAGGAACTACTTGTGGCCAACGTCTTGAGAAGGTGTTTGGAACTGAGCACTCCCACATTCTTCGAGTTCCCTTTAGAACTGAGAATGGAATTGTTCGCAAGTGGATCTCAAGATTCGAAGTCTGGCCCTACTTGGAAACTTACACCGAGGATGTTGCTCATGAGCTTGCCAAAGAGTTGCAAGGCAAGCCAGATCTGATCGTTGGAAACTACAGTGATGGAAACATTGTCGCCTCTTTGTTGGCACATAAATTGGGTGTCACTCAGTGTACCATTGCTCACGCACTTGAGAAGACCAAATACCCCGAATCCGACATTTACTGGAAAAAATTGGAAGAGAGATACCACTTCTCTTGCCAATTCACAGCTGATCTATTTGCCATGAACCACACAGATTTCATTATCACCAGTACCTTCCAAGAGATTGCTGGAAGCAAGGACACTGTTGGACAGTATGAGAGTCACACAGCCTTCACCCTTCCTGGACTCTACCGTGTTGTGCATGGTATTGATGTCTTTGATCCAAAATTCAACATTGTCTCCCCCGGAGCTGATCAAACCATTTACTTCACCCACACCGAAACTAGCCGTAGGTTGACCTCCTTCCACCCAGAAATCGAAGAACTCCTGTACAGCTCAGTGGAGAATGAAGAACACATATGTGTGCTGAAGGACCGCACCAAGCCAATTATCTTCACCATGGCAAGGTTGGACCGTGTGAAGAACATCACAGGACTTGTGGAGTGGTATGGTAAGAACGCCAAGCTGAGGGAGTTGGTGAACCTTGTGGTTGTTGCCGGAGACAGGAGGAAGGAGTCCAAGGACTTGGAAGAGAAGGCCGAGATGAAGAAGATGTACGGCCTCATCGAGACCTACAAGTTGAATGGCCAATTCAGATGGATTTCCTCTCAGATGAACCGTGTGAGGAACGGAGAGCTGTACCGTGTGATCTGTGACACCAAGGGTGCTTTTGTGCAGCCTGCTATATATGAGGCTTTTGGTTTGACAGTGGTTGAGGCCATGACTTGTGGGTTGCCAACATTTGCCACATGCAATGGTGGTCCTGCTGAGATCATTGTCCATGGCAAGTCTGGATTCCACATTGACCCTTACCATGGTGACCGTGCTGCTGATATCCTTGTTGACTTCTTTGAGAAGTGCAAGGTTGACCCAACTCACTGGGAAAATATCTCCAAGGGTGGTCTCCAGCGTATTGAAGAGAAGTACACATGGCAAATTTACTCTCAGAGGCTTCTCACCCTCACTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAACCTTGACCGCCTTGAGAGCCGCCGCTATCTTGAGATGTTCTATGCTCTCAAGTACCGCAAATTGGCTGAGTCTGTGCCCCTTGCTGTTGAAGAGTAA 2421 0.4816 MATDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEYLHFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPETPYSEFEHKFQEIGLERGWGDTAERVLESIQLLLDLLEAPDPCTLETFLGRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTENGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFTHTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRTKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAIYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADILVDFFEKCKVDPTHWENISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00594 806 FunFam Sucrose synthase 280 558 - -
Pumo4g00594 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Pumo4g00594 806 Gene3D - 25 145 - -
Pumo4g00594 806 Pfam Glycosyl transferases group 1 564 738 IPR001296 GO:0016757
Pumo4g00594 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Pumo4g00594 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Pumo4g00594 806 FunFam Sucrose synthase 146 275 - -
Pumo4g00594 806 NCBIfam sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
Pumo4g00594 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Pumo4g00594 806 FunFam Sucrose synthase 11 145 - -
Pumo4g00594 806 Gene3D - 146 275 - -
Pumo4g00594 806 PANTHER - 7 804 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00594 Pumo-Chr4 7795800 7800840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00594 6 806 Glycosyltransferase AT3G43190 85.393 0.0 1438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00594 K00695 - gmx:547508 1598.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00594 4 7795800 7800840 Pumo4g00594 4 7795800 7800840 ECH
Pumo4g00594 4 7795800 7800840 Pumo2g01812 2 33888028 33896359 PCT