Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00578 ATGTTTAGATTAAAGAATTGTGAAGGCCCTGTGCGCTTCTTGTATCAGCGAACTCGGCATCACCTTCACCATAACAATATTATGGCTTATTTAGTTGGTTATGATCCTTGTTCCCACTTGAGCAAGGCCTTTTCTCAGTACCCTTCTCTTTCTTCTGATCGGGGTAGCTACCTGTCTTTCCCATTTCTCCATAATCTTGTTTATGCTAATGTTTTTGGGGTTAGCAGAAGCATTGGTTTTGGTCCTAGAGGTTGTAGCTTTGACACTAGTGGCAGTTGTAGTGGTAATAGTGATAGGATCTTTGTGAGGGCAAAGGCAAGGCCCCGTGGCTTTGCATCGAATCACCGCCAGCCAATGTTGGCTGATTTGGAGCGAAGGAATTCTGTTAGGAGTGATGAGAGTGATGAGAGTGATGCTACTTTGGTTAAGGTTGATAATGGATCTATAAATGGAAGTCCTGCTAAGCCTCCTTGTTTCAATGATCACCGGTTGTCCCAGAAACTTGTGGTTGCTGTTGATGTTGATGAGGTATTAGGAAACTTTGTGTCAGCTCTCAACAAGTTCATTGCAGATCGATATTCATCAAATTATTCAGTTTCTGAATATCACGTGTATGAGTTCTGCAAGATATGGAATTGTTCACGTGATGAAGCTGATATCCGTGTTCATGAGTTTTTTAAGACTCCATATTTCAAGTCAGGGATCCTCCCTCTTCCAGGTGCTCAGACGGCTCTTCAGAAGTTATCAAGATTTTGTAGCCTATCAATTGTAACATCACGGCAGAATGCAATTAAGGACCACACAATTGAGTGGATAGAGAAGAATTTTCCAGGACTGTTTCACGAGATTCACTTTGGTAACCACTTTGCTCTTGATGGTGTGTCAAGACCAAAGTCAGAAATTTGTAGGTCTTTAAATGCCAAGGTTCTTATTGATGATAACCCACGATATGCCAAAGAATGTGCTGACGTTGGAATTAGGGTCTTACTTTTTGATTATGAAAACTCATATCCTTGGTGCAAGAACGAGTCTGTTGATCAGCATCCTCTGGTGACCAAAGTTAAGAACTGGGAAGAGGTGGAACAACAATTAATGTCACTGATAGCTTCGTAG 1113 0.4151 MFRLKNCEGPVRFLYQRTRHHLHHNNIMAYLVGYDPCSHLSKAFSQYPSLSSDRGSYLSFPFLHNLVYANVFGVSRSIGFGPRGCSFDTSGSCSGNSDRIFVRAKARPRGFASNHRQPMLADLERRNSVRSDESDESDATLVKVDNGSINGSPAKPPCFNDHRLSQKLVVAVDVDEVLGNFVSALNKFIADRYSSNYSVSEYHVYEFCKIWNCSRDEADIRVHEFFKTPYFKSGILPLPGAQTALQKLSRFCSLSIVTSRQNAIKDHTIEWIEKNFPGLFHEIHFGNHFALDGVSRPKSEICRSLNAKVLIDDNPRYAKECADVGIRVLLFDYENSYPWCKNESVDQHPLVTKVKNWEEVEQQLMSLIAS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00578 370 SUPERFAMILY HAD-like 161 365 IPR036412 -
Pumo4g00578 370 PANTHER NUCLEOTIDASE YQFW-RELATED 84 369 - -
Pumo4g00578 370 Gene3D - 203 367 IPR023214 -
Pumo4g00578 370 Pfam 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 168 364 IPR010708 GO:0008253|GO:0009264
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00578 Pumo-Chr4 7606791 7610742 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00578 - - gmx:100793947 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00578 4 7606791 7610742 Pumo4g00578 4 7606791 7610742 ECH
Pumo4g00578 4 7606791 7610742 Pumo2g01831 2 34325561 34330580 PCT