Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00555 ATGATGAATGCATTACTTTATTATCAATTTAATAACATTTGCATAGAAATTCACATGCCCTCTATTATATTTACGTACCGACCATATTCTGTTTTTTCGTGGACCGCATTCACCTTCCTTCACGATTACCATTACCATTCTATTCTCCCTCTCCTTCACCCAACCAGTTTCCTCGTTTCTCCGACAACTTCTTCCTTAATCACATCGAACGCTCCTGTCATGGAGGAAGTTGTTAACGTTGTGGAAACTAAGGATGGAACTGTCTCAGTAGCTTCTGCGTTTGCTGGTCACCAGGAAGCCGTGCAGGATAGAGACCACAAATTTTTAAGAAAAGCTGTTGAAGAAGCATATAAAGGGGTAGATTGTAAAGATGGAGGTCCATTTGGTGCTGTTATAGTTCGTAATGATGAAATAGTTGCTAGTTGTCACAACATGGTTCTGAGTAACACAGACCCAACTGCTCATGCTGAGGTGACAGCAATAAGAGAGGCGTGTAAGAAGCTTAAGCAGATAGAACTTGCAGATTGTGAAATATATACTTCTTGTGAACCTTGCCCCATGTGCTTTGGTGCAATCCACCTTTCTCGAATTAAGAGGTTGGTTTATGGAGCAAAGGCTGAGGCAGCAATTGCTATTGGGTTTGATGATTTTATTGCTGATGCATTGCGAGGTACTGGATTCTATCAGAAAGCAACATTGGAAATTAAAAGAGCTGATGGTAATGAGGCCATCATTGCTGAAGAGGTTTTTGAGAAAACAAAGGAAAAATTCCAAATGTATTAA 783 0.401 MMNALLYYQFNNICIEIHMPSIIFTYRPYSVFSWTAFTFLHDYHYHSILPLLHPTSFLVSPTTSSLITSNAPVMEEVVNVVETKDGTVSVASAFAGHQEAVQDRDHKFLRKAVEEAYKGVDCKDGGPFGAVIVRNDEIVASCHNMVLSNTDPTAHAEVTAIREACKKLKQIELADCEIYTSCEPCPMCFGAIHLSRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKATLEIKRADGNEAIIAEEVFEKTKEKFQMY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00555 260 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 103 217 IPR002125 -
Pumo4g00555 260 Gene3D Cytidine Deaminase, domain 2 104 260 - -
Pumo4g00555 260 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 97 207 - -
Pumo4g00555 260 SUPERFAMILY Cytidine deaminase-like 98 218 IPR016193 GO:0003824
Pumo4g00555 260 FunFam tRNA-specific adenosine deaminase 103 259 - -
Pumo4g00555 260 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 155 192 IPR016192 GO:0008270|GO:0016787
Pumo4g00555 260 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 104 203 IPR002125 -
Pumo4g00555 260 CDD nucleoside_deaminase 109 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00555 Pumo-Chr4 7328862 7331978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00555 - - gmx:100820230 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00555 4 7328862 7331978 Pumo2g01843 2 34606042 34608565 PCT