Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00548 ATGCGAGAGGCTGCAGTTGAGTATCATGAGCTTAAAATGTTAGAACAGGAGATTTCTTCCCACAAGGATGACCCTGACATTCCATGTGGAGCTGCCTTAAAAAAAATGGCCAGCCTATTAGACAAGTCTGAGCGGAGCATACAAAGGCTAATCAAGCTGCGAAGTTCAGTCATACATTCATATCAAATGTACAACATTCCAACTGCATGGATGCTTGATTCTGGAATAATGAGCAAGATAAAGCAGGCTTCCATGACTCTGGTCAAGACGTACATGAAAAGAGTGACAATGGAGGTTGAATCCATTCGGAATTCGGACAGAGAATCTATTCAAGATTCTCTTCTGCTTCAGGGTGTGCATTTTGCGTATAGGGCTCATCAGTTTACTGGAGGATTGGACTCAGAAACAATGTGTGCTTTTGAAGAGATAAGACAACGTGTGCCAGGACACCTAGCAGGGTCTCGGGAACTTTTGGCTGGCATACCATAA 489 0.4356 MREAAVEYHELKMLEQEISSHKDDPDIPCGAALKKMASLLDKSERSIQRLIKLRSSVIHSYQMYNIPTAWMLDSGIMSKIKQASMTLVKTYMKRVTMEVESIRNSDRESIQDSLLLQGVHFAYRAHQFTGGLDSETMCAFEEIRQRVPGHLAGSRELLAGIP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00548 162 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 149 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00548 Pumo-Chr4 7263650 7265301 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00548 - - gmx:100820135 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00548 4 7263650 7265301 Pumo4g00548 4 7263650 7265301 ECH
Pumo4g00548 4 7263650 7265301 Pumo2g01848 2 34791735 34796630 PCT