Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00499 ATGTTAGTTAGCAACATCAACACGCATTTCGATGACGGTGGTCGGACTCTTCCTCACCGCCGACGAAGGCTCGCCGGAGCTCTGGTCACTCTCACCGTCGCCGCCAACGCCTTCTCCTACTCCCTCTTTCGCAAGAAGAACCTTCGCCGTTTCCGCTCCCCCATCGACGAATCCGAAGACACTCTCGCTCACTTTAACGTCACCGAAGGGGGAGATGGATTTTTCTTTGGTTTGGCAACAGCGCCAGCACATGTTGAGGACAGGCTTGATGATGCTTGGATCCAGTTTGCTGAGGAAAAGAGTGGTGAAGGTGGTGGTGACTCAGAGGGGAGGCAGAGAGCGGATGCTGTGATGGGTTCTGCTTCTGGTGACGGTGGGTCCCAGCGGGCTGCAACATCTCCGCGGGGGAGGAAGCCTCTGAAGGTGGCGATGGAGGCCATGATTAGGGGATTTGAGAAGTACATGGAAGTGGAAGGCCAAGAAGGAGAAGAAGAAGTCCGTCCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGGTTTTGGTCTGATCCTGAAACAGAAATAAAATTGGCCAAGGATACTGGTGTTACTGTTTTTCGCATGGGAATAGATTGGTCAAGAATCATGCCAGTGGAGCCAGTAAATAGCCTTAATGAATCTGTTAACTATGCTGCATTGGAACGGTATAAGTGGATTATCAATAGGGTTCGATCATATGGAATGAAGGTGATGCTCACTCTTTTTCATCACTCACTTCCACCTTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACCAGGCTTGTTGCAGACAGTGTCTCAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGTATGCTTACTTATTGTGCTGGAGCTTGGCCTGGTGGTCATCCTGATATGCTTGAGGCTGCTACTTCTGCACTTCCAACAGGTGTTTTCCAGCAGGCCATGCATTGGATGTCTATTGCACACTCAAAGGCATATGACTACATCCATGAACTAAGAAACCCATTAAATTCAATAGTCGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTTTGTTTGATACTGCTGCTGTTTCACTGGCCAATTCATTGACTCTCTTCCCATACATTGATGCAATATCTGACAAGCTGGACTATATAGGCATAAACTACTATGGGCAGGAAGTGGTTTCGGGTGCAGGCCTGAAGCTGGTGGAAAATGATGAGTACAGTGAATCTGGTCGTGGGGTATACCCTGATGGCTTATACCGCATGTTGCTTCAGTACCATGAAAGATACAAACATCTAAATATTCCCTTCATCATTACTGAAAATGGGGTTTCAGATGAGACAGATTTGATCCGCCGGCCATATCTCTTGGAGCATTTGCTTGCTATTTATGCTGCCATGATCATGGGTGTGCGTGTGCTTGGTTACCTGTTCTGGACTATTTCTGATAACTGGGAGTGGGCCGATGGATATGGTCCCAAGTTTGGACTTGTTGCGGTTGACCGGGCAAATAATCTTGCACGGATCCCTCGCCCCTCTTACCATCTATTTTCTAAGATTGTGAATACAGGCAAAGTTACACGTGAAGATCGTGAAAGAGCATGGGATGAACTCCAAAGAGCTGCAAAAGAGAAGAAAACAAGGCCATTTTATCGGGCTGTGGATAAACACCGTTTAATGTATGCAGGTGGACTTGATGAACCTGTACAGCGACCTTATATAGAACGAGATTGGCGGTTTGGTCATTATCAGATGGATGGACTCCAGGATCACTTGAGCCGCTTCTCAAGATCCATTTTTCGACCATTCTCCCTCTTCTCCCTAAAAAGGAAACCAAAATCTCAAAAGAAGAATGCCAAATTAATTCTTCAGCCTCTTGAAGCTTAG 1947 0.4679 MLVSNINTHFDDGGRTLPHRRRRLAGALVTLTVAANAFSYSLFRKKNLRRFRSPIDESEDTLAHFNVTEGGDGFFFGLATAPAHVEDRLDDAWIQFAEEKSGEGGGDSEGRQRADAVMGSASGDGGSQRAATSPRGRKPLKVAMEAMIRGFEKYMEVEGQEGEEEVRPNVTAWHNVPRPEERLRFWSDPETEIKLAKDTGVTVFRMGIDWSRIMPVEPVNSLNESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVADSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEAATSALPTGVFQQAMHWMSIAHSKAYDYIHELRNPLNSIVGVAHHVSFMRPYGLFDTAAVSLANSLTLFPYIDAISDKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQYHERYKHLNIPFIITENGVSDETDLIRRPYLLEHLLAIYAAMIMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKVTREDRERAWDELQRAAKEKKTRPFYRAVDKHRLMYAGGLDEPVQRPYIERDWRFGHYQMDGLQDHLSRFSRSIFRPFSLFSLKRKPKSQKKNAKLILQPLEA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00499 648 SUPERFAMILY (Trans)glycosidases 171 549 IPR017853 -
Pumo4g00499 648 Pfam Glycosyl hydrolase family 1 190 375 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 Pfam Glycosyl hydrolase family 1 395 543 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 ProSitePatterns Glycosyl hydrolases family 1 active site. 457 465 IPR018120 -
Pumo4g00499 648 PANTHER GLYCOSYL HYDROLASE 184 389 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 MobiDBLite consensus disorder prediction 100 138 - -
Pumo4g00499 648 Coils Coil 646 648 - -
Pumo4g00499 648 Gene3D Glycosidases 152 555 - -
Pumo4g00499 648 PRINTS Glycosyl hydrolase family 1 signature 457 465 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 PRINTS Glycosyl hydrolase family 1 signature 469 480 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 PRINTS Glycosyl hydrolase family 1 signature 514 526 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 PRINTS Glycosyl hydrolase family 1 signature 400 414 IPR001360 GO:0004553|GO:0005975
Pumo4g00499 648 PRINTS Glycosyl hydrolase family 1 signature 490 507 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00499 Pumo-Chr4 6650773 6657217 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00499 23 620 Glycoside Hydrolase AT3G06510 63.009 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00499 K21362 - gmx:100792401 1188.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00499 4 6650773 6657217 Pumo4g00499 4 6650773 6657217 ECH