Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00497 ATGAATGTTATTCTGTGTCTCCAGTTCCTATGTTTCTTTTTTCTATTAAGTACTTGGTTCATTAAAGCATCTGCAATAAATGTGGAAACCTATGAATCTGATAGAATAATCGACCTTCCTGGCCAACCTTCAAGCCCCTCAGTCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGGAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAATCTGAACCCTCCAACAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGCAGTTGTTGAGATTGGACCTCTTATAGTCAACAAAAATGGGGAAGGACTACATTTCAACACATACTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCCCCTGTTGGAGTTGGATTTTCTTATACTAACACATCTTCTGATCTCACCATATTAGAGGATAATTTTGTGGCTGAGGATACCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGTTATGGTGGTTGGTGTTTAACTTCACCGTGA 582 0.4089 MNVILCLQFLCFFFLLSTWFIKASAINVETYESDRIIDLPGQPSSPSVSHFSGYITVNENHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLIVNKNGEGLHFNTYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDNFVAEDTYNFLVNWLQRFPQFKSRDFFISGESYGGWCLTSP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00497 193 SUPERFAMILY alpha/beta-Hydrolases 32 189 IPR029058 -
Pumo4g00497 193 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Pumo4g00497 193 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Pumo4g00497 193 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pumo4g00497 193 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Pumo4g00497 193 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 37 188 IPR001563 GO:0004185|GO:0006508
Pumo4g00497 193 Gene3D alpha/beta hydrolase 30 192 IPR029058 -
Pumo4g00497 193 Pfam Serine carboxypeptidase 40 187 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00497 Pumo-Chr4 6625651 6633005 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00497 K16297 - gmx:100792930 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00497 4 6625651 6633005 Pumo4g00497 4 6625651 6633005 ECH