Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00479 ATGGACGCCGATAACGGTTCGAGAGACGCCAAACTCGACAACGCACCCATGCAAATGGATTCCGACGACTCTTCCGGCGCTCAAGCAATAGACAAAGAAAAGGAGGAACTCGCAGAGAATATGAACAAGCTGCATATTGAAGGATCTTCGTCTGGAAATGGATCACCTAACTTCAGAAGAAAACCGGTCATTATCATAGTTGTAGGAATGGCAGGGAGTGGGAAAACAACACTCATGCATAGGTTGGTTTGCCATACACATTTGAAAGACATTCGGGGTTATGTGATGAATCTCGACCCCGCAGTCATGACACTCCCATATGCTGCTAACATTGATGTAAGAGACACTGTTAAATACAAAGAAGTAATGAAGCAGTTTAACCTTGGCCCTAATGGCGGAATTTTGACTTCCCTGAACTTGTTTGCCACCAAGTTTGATGAGGTAATTTCTGTAATTGAGAAACGGGCAGATCAACTTGACTACGTTCTAGTGGATACCCCTGGTCAGATTGAAATATTCACCTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCATCCACATTTCCCACTGTAGTTGCCTATGTAGTTGATACACCCCGTTCAGAAGATCCCACCACTTTCATGAGCAACATGTTGTATGCTTGTAGTATCCTCTATAAGACAAGGTTACCTCTCATCTTGACGTTCAACAAGGTTGATGTAGCAGCACATCAGTTTGCTTTGGAGTGGATGGAGGATTTTGAGGCATTCCAAACAGCAGCAAGTTCAGATCACTCGTACACATCAACTTTAACTCAGAGCCTTTCTCTTGTGCTAGATGAATTCTACAACAATTTAAAATCAGTTGGAGTTTCTGCAGTTTCTGGTGTAGGAATGGAAGCCTTCTTTAAGGCTGTCGAAGACAGTGCAGAGGAATACATGGAGACCTATAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCAACGTTTGGAGGAAGACCGCAGGAGGGAGAACATGGATAAACTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACTGTAGTCTTGAGCACTGGTTTGAAGGACAAAGAAGCAAGTAAAAGTAAAAGCATGATGGATGAGGAAGATGAGGTTGAGGAGGACGAGGAAATGGATGATGATGATGATGATTTGGGGATATATACTGAAGAGGAGGATGCTATAGATGAGGACGAAGATGAGGAGGTTGATAGGTTCGGCTTCTGA 1233 0.4371 MDADNGSRDAKLDNAPMQMDSDDSSGAQAIDKEKEELAENMNKLHIEGSSSGNGSPNFRRKPVIIIVVGMAGSGKTTLMHRLVCHTHLKDIRGYVMNLDPAVMTLPYAANIDVRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISVIEKRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSEDPTTFMSNMLYACSILYKTRLPLILTFNKVDVAAHQFALEWMEDFEAFQTAASSDHSYTSTLTQSLSLVLDEFYNNLKSVGVSAVSGVGMEAFFKAVEDSAEEYMETYKADLDKRREEKQRLEEDRRRENMDKLRRDMEKSGGETVVLSTGLKDKEASKSKSMMDEEDEVEEDEEMDDDDDDLGIYTEEEDAIDEDEDEEVDRFGF 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00479 410 Gene3D - 62 320 IPR027417 -
Pumo4g00479 410 MobiDBLite consensus disorder prediction 321 346 - -
Pumo4g00479 410 MobiDBLite consensus disorder prediction 321 410 - -
Pumo4g00479 410 MobiDBLite consensus disorder prediction 370 410 - -
Pumo4g00479 410 Coils Coil 309 336 - -
Pumo4g00479 410 Pfam Conserved hypothetical ATP binding protein 67 305 IPR004130 -
Pumo4g00479 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 303 IPR027417 -
Pumo4g00479 410 Coils Coil 27 47 - -
Pumo4g00479 410 PANTHER XPA-BINDING PROTEIN 1-RELATED 66 324 IPR004130 -
Pumo4g00479 410 CDD GPN1 63 303 IPR030230 GO:0003924
Pumo4g00479 410 FunFam GPN-loop GTPase 1 62 320 - -
Pumo4g00479 410 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00479 Pumo-Chr4 6317945 6321465 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00479 K24104 - gmx:100797318 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00479 4 6317945 6321465 Pumo4g00479 4 6317945 6321465 ECH