Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00458 ATGGATCGACAATCGCCGGAGAAACTAATACTCTTGAACCGCGAGCCAAACGGCGTCGCACTGGTGACGATTAATCGTCCCGGTTCCCTTAACTCGCTGACCCGGGCCATGATGGTGGACCTGGCCCAGGCTTTCAAGAGACTCGACCGGGACGAGTCGGTGCGGGTCATCATATTAACCGGGTCGGGCCGGTCATTCTGTTCTGGCGTGGATCTCACGGCGGCAGAGGACGTGTTCAAGGGCGACGTGAAGGACCCGGAGAGCGACCCGGTGGTGCAAATGGAGCTCTGCCGCAAGCCAATCATCGGAGCCATCAGAGGATTCGCCGTCACTGCTGGCTTCGAAATTGCCCTCGCCTGTGACATCTTGGTTGCTGCCAAGGGATCTAAGTTCTTGGACACTCATGCTAGGTTTGGGATATTTCCTTCGTGGGGTTTGTCTCAGAAGCTTTCGCGCATCATAGGGGCCAATAAAGCCCGCGAGGTATCTCTCTCGGCCACACCTTTGACTGCAGAAGTAGCTGAGAGGCTGGGTTTCGTGAACCATGTCGTTGAAGAGGGTGAATTGTTGAAGAAAAGCAGGGAAATTGCAGATGCCATTGTGAAAAATAACCAAGACTTAGTGTTGAGGTACAAGGCGGTCATCAATGATGGCCTCAAGCTGGATCTTGGCCGTGCTCTTTCTCTTGAAAAGGAGAGGGCTCATGATTACTATAACGGAATGACGAAGGAGCAATTCAGGAAGATGGAGGAATTCATAGCTGGTCGAAGTTCCAAGAAACAGTCCAAATTGTAG 795 0.5258 MDRQSPEKLILLNREPNGVALVTINRPGSLNSLTRAMMVDLAQAFKRLDRDESVRVIILTGSGRSFCSGVDLTAAEDVFKGDVKDPESDPVVQMELCRKPIIGAIRGFAVTAGFEIALACDILVAAKGSKFLDTHARFGIFPSWGLSQKLSRIIGANKAREVSLSATPLTAEVAERLGFVNHVVEEGELLKKSREIADAIVKNNQDLVLRYKAVINDGLKLDLGRALSLEKERAHDYYNGMTKEQFRKMEEFIAGRSSKKQSKL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00458 264 CDD crotonase-like 11 200 - -
Pumo4g00458 264 Gene3D - 3 238 - -
Pumo4g00458 264 SUPERFAMILY ClpP/crotonase 8 260 IPR029045 -
Pumo4g00458 264 Pfam Enoyl-CoA hydratase/isomerase 15 239 IPR001753 -
Pumo4g00458 264 PANTHER ENOYL-COA HYDRATASE 5 263 - -
Pumo4g00458 264 FunFam probable enoyl-CoA hydratase 1, peroxisomal 7 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00458 Pumo-Chr4 6042592 6045348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g00458 18 216 Acyl Lipid Metabolism Gene Families AT1G60550 33.654 5.02e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00458 K01692 - gmx:100170725 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00458 4 6042592 6045348 Pumo4g00458 4 6042592 6045348 ECH