Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00350 ATGGAATACAGAACGCTAGAACTGAACCTGACATCAGCAAAGGATCTCAAAGATCTGAACCTGTTCTCGAAGATGGATGTATACGCTGTGGTTTCACTGTCCGGCGATCAAAAGAGCAAGAGTCCCGTCAACAGAAACGGCGGCACCAACCCCACCTGGAATTTCCCCGTGAAGTTCACTTTTGATGAATCGCTGGCGCGCCAGAACCGCTTGAGCCTCGAAATCAAGCTCCGCTGCGAGCGCACCCTCGCTGGTGATAAAGACATCGGCCAGGTCCACGTCCCTCTCCAAGAGCTTCTAAACCAACCCGGTAACGGAAAATCCTTCCAACACGTTAGTTACCAGGTCAGAAAACCCTCTGGCAAACCCAAGGGAGCCTTGAATTTCTCCTACAAATTTGGCGATAAATTCTCGACTCCAGCCAAAGCATCGGCGCCGGAGCTGGTCCAGCACAACGTGGAGCCGGTCACGGCTTATCCTGCTCCCGCGGTGGGGTCCACTTCTTCTGCTGCCGCGTATTCCGGCATTTATCCTCCGCCGCCAACACAGTATGCGGCTGGATATGGGTATCCTCCGCCGCCGCCGCCACAACACGGTTACGGATACGGATACGCGCCACAAGCGGGCTATGGGTACGCGCCACAACCCGGGTACAGTTACCCTCCTCCTCCTCCTCCTCCTCCTCCGGTTCAAAGACCCGCGAAGAACAATTTTGGAATGGGATTGGGAGCGGGGTTGCTTGGAGGAGCCTTGGGTGGACTTCTAATTGGGGACATGATATCTGATGCCGGTGCTTACGATGCCGGCTATGACTCTGGTTTTGGTGATACTGGTGGATTTGGTTTTTAA 849 0.5453 MEYRTLELNLTSAKDLKDLNLFSKMDVYAVVSLSGDQKSKSPVNRNGGTNPTWNFPVKFTFDESLARQNRLSLEIKLRCERTLAGDKDIGQVHVPLQELLNQPGNGKSFQHVSYQVRKPSGKPKGALNFSYKFGDKFSTPAKASAPELVQHNVEPVTAYPAPAVGSTSSAAAYSGIYPPPPTQYAAGYGYPPPPPPQHGYGYGYAPQAGYGYAPQPGYSYPPPPPPPPPVQRPAKNNFGMGLGAGLLGGALGGLLIGDMISDAGAYDAGYDSGFGDTGGFGF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00350 282 CDD C2_SRC2_like 5 129 IPR044750 GO:0006952
Pumo4g00350 282 SMART C2_3c 5 108 IPR000008 -
Pumo4g00350 282 PANTHER INGRESSION PROTEIN FIC1 1 257 - -
Pumo4g00350 282 Pfam C2 domain 5 109 IPR000008 -
Pumo4g00350 282 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Pumo4g00350 282 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 135 IPR035892 -
Pumo4g00350 282 Gene3D C2 domain 4 134 IPR035892 -
Pumo4g00350 282 MobiDBLite consensus disorder prediction 215 234 - -
Pumo4g00350 282 MobiDBLite consensus disorder prediction 216 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00350 Pumo-Chr4 4882626 4883794 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00350 - - gmx:100784458 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00350 4 4882626 4883794 Pumo4g00350 4 4882626 4883794 ECH
Pumo4g00350 4 4882626 4883794 Pumo2g01405 2 20906095 20907580 PCT