Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00339 ATGCAAGCCAATACTGAGTTCGAGGAAGGAGAGGCTTTCTTCTGTTATAAGGATGATGATGACGACAACATTGACCTTGATTCTCTCTCTTACATTGATGAGAGGATTCAACATGTTCTGGGTCATTTTCGAAAGGAATTTGAAGGAGGTATTTCTGCTGACCGTTTGGGTGCAAAATTTGGTGACTATGGCTCCTTTTTACCTACCTGTGAACGCTCTCCTCCTTTGCGATCTTGTCCAAAGACTCCACAAAAACACAATAGTTCACCAAAATCTCCTAGCAATCTCCACATGGCGGCTGCATTTCATAACTCAAAAGCACCTCCAAATATGCCTTCTTCTATGAGGCTTGGAACTGCTTCCTATAAAGCTCCTCCAATTCGTAATATAAGAGTACCTTCAGTGGATGACTCGGTAAAGAACACAGATATTTCCTCCAATGAAGTAATAGAGAAGTTCACTTTGAAAGACTGTGCAAATAAGTCAGAAAATTTAACTGACCAAAGAACACTGAAGTTGCGAATCAAAGTGAAATCAGATATCTTAGCAAAAAAGAATGCAGCAATTTACAGTGGTCTTGGACTTGATGACTCTCCATCTTCATCAATGGAGAACAGCCACGAGGAAAGTGAAGATATGCCACATGTATCTCAAGAAACCCCTGAAGAATCTCTAACTAGGATTGTTCAGGTTATGACTTCTTTAACTATCCCTGGAGGTGTGCAAATATCACCTCTACATGACAGTCTCCTCTACTTGATAAGAAAGGAAAAAGCTCTTGGAAACAGCAAACCCGTGTCTTCTCTTAATGGTCATCAAGAACATTATTCCATGTCTACTGATGAATCAGATTCTTTTGTGGGGGATGGACATTTGTTGAAGAAAAGGAAAGTGACAGTTGTGGACCAAAGTGACAAGCAGCATATGAATGGTAACTGTTCTGAGAATGATATGACATTGCATACAAAGAAAAAATTAGGAAATAGAACTCCGGATCGTAAGGACTTTCTATCTAATGACCTGAGATGCACGCCACTGTCAAGTTCAATTTGTGATGCTGGTGAAACAGCTGAAGTCACTGGTAAGGCTTTTGAAGTATCCAAGGAGGTCAATAAAGATGGTGTGAAATGTAGAAAGGTTTCCACTGAAGCAGTGAAGGAGGATTCACTAGAGTCAATATCTGGTCAGGATTTTGACAAGATTGAGAAGCAAAATACAGGAAGTAGCTTTATGAAAAAAGTTTTAGAGCATAAAATTGAAATTTCTCAGAATAATAATTCTACTGATCCTAAGATTAATAGCAAGTGTAACGCATTTGCAATTTCAAAAGGGATCAAGTGTGATGCAGTGAAATGTAAGGTGGATCAAGATACTCAAAAGTGTGGAACTAATAAAAAAGGAAAGGTAAAATCTGAAAGCAAGAATGAGTCAAAAGGTGAAAGGAGTCCTGGAAAAGTTATGACTGATGCTGAAAAACATAGCATTGGTACTAGTAATAATGCAATGGTAAATCATAGAAAGAGTACTGGCATTGGTGTTACTTCTTCGAAAAGTAAAATGCATAAAATAAAGTCACTGAAGGATAATAAGGTCAGAGTTTGTGACAGAGATTCATCGAAAGGAAAAAAATCACAACGGAAAGTTGATGGAATAAATCCAACTGATGGGCTTACCCTTAATAAGGCTACAGTAAATGCTAACCTTGATCATGTTGATAAGAGTGTGTATAGGGTTAAAGTAAAGGAAAGACCAAGTGGCAATAAAGTTGTTAATCAGTTGTCAGCTGGGCCATGTGTAAAAGATGCTCCAGGTGCATTTCCTATTGCTGAAAATAAACCAACTTCTGAGATGGTTCCGCCATCAGCAGCAGCAGCACCTCAACTTATCGAAGAAGATTGGGTATGCTGTGACAGTTGCCAGAAATGGCGGCTTCTACCTATGGGTTTAAAGCCTGAGCAGCTTCCAGAGAAATGGTTGTGTAGCATGCTATATTGGCTGCCTGGAATGAATCTGTGTAACATCAGTGAGGAGGAGACAACAAAAGCACTTTATGCTTCATATCAAATGCCGATTTCTGAGGGTCAAAATAGCATGCAAAGCCATGCCACTGGACCTGAAACTGGAGTTAGATCTGTTGATGCTCTGCAACTTGGCCTGAATCACAAAAAGTCCAGTTCTGATGTAATGCTTGATCGAGGAAAGAAGAAACATGGTATTAATGAAAAGGCAAGGTCAGGAATCAATAATGACATGCACCAGTTGGCAAATACAGAAAAGAACAATGCTCAAGAGTCTGTTAAAAATAGAAGCTTGAATGACATGAATCAGCGGTCTGCAGACTCAAACCGTATGAAGAAATCTATTTCTAAACATTCGAGCAGGTTGAACAATTTGATAGAAGAGAAAAACACACCTAAGGTGAAAGAAAAGCAACTGAATGGAGGTGACAGAAATCATGTTAGATTGAAACGTAAGATGGAGGATAATCAACATGGATCTGGAACTCCTAAGAAATCTAAGACTGAAGATGTTTGCTATGCTGGTAAACAACTGAATCCTGGCATGCAATTTAAAAAGGTGGGTCTAAACTCAAGAAATGGTTTACCAACAAAGGCTAGTGGGAAAAATATGAGGAAATATGATGATTATTGTTGGTCTGATGATCTAGAGGACAAGTTGGTAGTTCCAGTAAAGAAAGGAGACCGGTCACAGTTTTCATCAGATGATGGTTCATTGGATGCTACAAACAGCAGCAAAAGTGGTTCAATTAAGAAAAGGAAAATGACTGACTGGCTGGATAATGAGAAACATAACAAAACATTGTCCTTGGAAAGCGATATGCAATGTGGTAAAGAAGGCAATGTAAATAGGAAGGAGAAGAAGTATATAGTTTTGAATACGGAGGCAAAATCAGTAACTGAAAGTGATGATAAATTGATTAGAGAAAGTGGGATGAAGCGAGTTTTTTTGTCAGACAGCAGGGACAAAATGACTATTGGGACAGAGGTGAAAAGTGTTAATAAGGTCCAGCAGCCAAGAAAGCACAAAAAAAATGTTGCTTCTTACCAAGCTTTGGATTGTTTTGATCCATTGGGTAAGGATTTAGGCTCTGGTCAACTTTCATTGGCAGCAACTTCAAGCTCTTCTAAGGTTTCAGGGTCTCATAAAGCTAGAACTAACCTTGAAGATGTCAGAGGTTCACCTGTAGAATCTGTTACCTCATCACCTTTGTGGACCTCCAACATGGACAAGCGTATTTTGGCAGCAGGGGACACATCAGAAAAAGATGATGCTAGAAAAGGTGGTCTTTCAAAAAGTTTGGATAATAGAGAGGGGAAGTTATCAGTAAAAATGGAGAGAGTTTCATACGACATACATCCTGCACATGGTAATTGTGGCAGCAGTTCACATCATGAGGAGAAAATGAACAAGAGTAATAAGGAAAATGCACTTTCTTGGCAGAAATCTGGTAAGGTTACATCATTACGGGTTAAGGAAAAGGAAAGAATTTCTGGTTCTGAGGTTAGTAGGGATAAGATGAAGGTTTCAGCTTCAGATAATGATTTTTACAAAAATGGTGTGAGTTATGAGTCAGCAGTTGATCCTAATCATCATGCTTCTGGTACTGAGACAAGAAACGATGTTAAGAACAGTTCTCTGAAGTCTAACCACAAGATTGACAACCCTAGTAAGAAAAATTCTTCAAGGCATTGGTCAAATGAAACTGGAAAGCAAACTGAGCTAAAACAAAAAGATTTTGGAAATCCAGTTCTGAAAGTGGGTGCTACATGTAGCACTAATAGAAAGATTATCTCCCAGCATAACCTGATTCAGAACTTTGAGGAAGAAAACAAAGCTAATCAAGTATGCACTGGATCAAGAGATGGGAAAGCCAAAGTGATCTCATCTTCTGAGGATAAAGTGAAAAGGGAAACATTATATGTGGGTTCTAGAACTGCACCTGAGTTGCAAAAGGGAGATATGTCTAATGGGCACCCAGTCCATGCATCTGGCAATGATGTTCCCAAGTTTGTGAGAAATTCAGTTGATGTTAATTGCAAGGTTGGAGTTAATCACAATTCAGAAAGTTTCATACCAGATGGACAACTCAACGAGTCAGGTCCTGTGACAACAAATTCTAGCCAAACTCCCTCTAGCATTCTGGAAGAAGCCACAAAACTAAAAGATTCTGCAGATCATTATAAGAATTCTGGGTTTGAGTTTGAAAGTAATGAGACTTATTTTAAAGCTGCCTTGAAGTTTCTGCATGGAGCATCACTTCTAGAAAGTTCTCACAGCGAGAGTAGCAAGCATGGAGAGATGAGTCAAATGCAAATATATGCTACTACAGCTAAACTTTTTGAATCCTGCGCCCATAAATATGAAAGACGCCAAGAAATGGCTGCAGCTGCTTTGGCATATAAATGCATGGAGGTGGTATACATGAGACTGGTTTACTGTAAACATTCTAGCATAAACAGGGATCGGCATGAGTTGCAATCAACTCTACAAATGGTTTCTCAAGGTGAATCTCCTTCGTCTTCTGCATCTGATATTGATAATTTAAATAACCTGGCGGTAGTGGATAAGGCTACTTTGACAAGGGGTTCTAATACTCATGTTGCTAACAATCAAGTCATATCTGCTCGGAATCGCCCAAATATTGTCAGGCTTCTTGATTTTACTCAAGACATAAATCTCGCAATGGAGGCTTCTAGAAAATGCAAGAGCACTTTCATGGCTGCTAACCTGAACATGGAAGAGGCACGGAATAGGGATTGCATAACTTCTATTAGGAAGGTTGTTGATTTCAGCTTCCAACATGTAGATGAGCTTGTACATCTGGTTTTGACTGCAACAAAAGCAATTACCCGTGCTGGTCTTGGTGGTGTTAGAGATTAA 4902 0.3913 MQANTEFEEGEAFFCYKDDDDDNIDLDSLSYIDERIQHVLGHFRKEFEGGISADRLGAKFGDYGSFLPTCERSPPLRSCPKTPQKHNSSPKSPSNLHMAAAFHNSKAPPNMPSSMRLGTASYKAPPIRNIRVPSVDDSVKNTDISSNEVIEKFTLKDCANKSENLTDQRTLKLRIKVKSDILAKKNAAIYSGLGLDDSPSSSMENSHEESEDMPHVSQETPEESLTRIVQVMTSLTIPGGVQISPLHDSLLYLIRKEKALGNSKPVSSLNGHQEHYSMSTDESDSFVGDGHLLKKRKVTVVDQSDKQHMNGNCSENDMTLHTKKKLGNRTPDRKDFLSNDLRCTPLSSSICDAGETAEVTGKAFEVSKEVNKDGVKCRKVSTEAVKEDSLESISGQDFDKIEKQNTGSSFMKKVLEHKIEISQNNNSTDPKINSKCNAFAISKGIKCDAVKCKVDQDTQKCGTNKKGKVKSESKNESKGERSPGKVMTDAEKHSIGTSNNAMVNHRKSTGIGVTSSKSKMHKIKSLKDNKVRVCDRDSSKGKKSQRKVDGINPTDGLTLNKATVNANLDHVDKSVYRVKVKERPSGNKVVNQLSAGPCVKDAPGAFPIAENKPTSEMVPPSAAAAPQLIEEDWVCCDSCQKWRLLPMGLKPEQLPEKWLCSMLYWLPGMNLCNISEEETTKALYASYQMPISEGQNSMQSHATGPETGVRSVDALQLGLNHKKSSSDVMLDRGKKKHGINEKARSGINNDMHQLANTEKNNAQESVKNRSLNDMNQRSADSNRMKKSISKHSSRLNNLIEEKNTPKVKEKQLNGGDRNHVRLKRKMEDNQHGSGTPKKSKTEDVCYAGKQLNPGMQFKKVGLNSRNGLPTKASGKNMRKYDDYCWSDDLEDKLVVPVKKGDRSQFSSDDGSLDATNSSKSGSIKKRKMTDWLDNEKHNKTLSLESDMQCGKEGNVNRKEKKYIVLNTEAKSVTESDDKLIRESGMKRVFLSDSRDKMTIGTEVKSVNKVQQPRKHKKNVASYQALDCFDPLGKDLGSGQLSLAATSSSSKVSGSHKARTNLEDVRGSPVESVTSSPLWTSNMDKRILAAGDTSEKDDARKGGLSKSLDNREGKLSVKMERVSYDIHPAHGNCGSSSHHEEKMNKSNKENALSWQKSGKVTSLRVKEKERISGSEVSRDKMKVSASDNDFYKNGVSYESAVDPNHHASGTETRNDVKNSSLKSNHKIDNPSKKNSSRHWSNETGKQTELKQKDFGNPVLKVGATCSTNRKIISQHNLIQNFEEENKANQVCTGSRDGKAKVISSSEDKVKRETLYVGSRTAPELQKGDMSNGHPVHASGNDVPKFVRNSVDVNCKVGVNHNSESFIPDGQLNESGPVTTNSSQTPSSILEEATKLKDSADHYKNSGFEFESNETYFKAALKFLHGASLLESSHSESSKHGEMSQMQIYATTAKLFESCAHKYERRQEMAAAALAYKCMEVVYMRLVYCKHSSINRDRHELQSTLQMVSQGESPSSSASDIDNLNNLAVVDKATLTRGSNTHVANNQVISARNRPNIVRLLDFTQDINLAMEASRKCKSTFMAANLNMEEARNRDCITSIRKVVDFSFQHVDELVHLVLTATKAITRAGLGGVRD 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 795 842 - -
Pumo4g00339 1633 PANTHER CW-TYPE ZINC FINGER 1 1625 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1088 1115 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 202 218 - -
Pumo4g00339 1633 Gene3D - 626 682 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 74 96 - -
Pumo4g00339 1633 Pfam CW-type Zinc Finger 633 678 IPR011124 GO:0008270
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 492 519 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 461 554 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1362 1385 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1160 1181 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 194 219 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 527 549 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 759 842 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 759 778 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1322 1341 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 264 283 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1200 1252 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1044 1115 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1207 1248 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 900 928 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1128 1181 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 1066 1081 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 907 922 - -
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 461 488 - -
Pumo4g00339 1633 ProSiteProfiles Zinc finger CW-type profile. 627 680 IPR011124 GO:0008270
Pumo4g00339 1633 MobiDBLite consensus disorder prediction 80 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00339 Pumo-Chr4 4770853 4780326 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00339 - - gmx:100793863 2807.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00339 4 4770853 4780326 Pumo4g00339 4 4770853 4780326 ECH
Pumo4g00339 4 4770853 4780326 Pumo2g01420 2 21053202 21063372 PCT