Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00185 ATGCCAAAGATTCTCAACACTACCAGAAAGCTGGTTGAGGGGTTAACATTTACAGACTCGGGTGCATTACTTGAAAACAATGTAATTACCAGCACACAGTTACACGATGATTCATCCAATTCTACAACCTCCATGTCCACCATGCAACTCTACGCAATCCTAGAGGCTGTAGCTGACAGAGTTGAAATGCACAAAAACATTGGTGAGCAGCGTGACAATTGGAACACCCTCCTCTTGAACAACATCAACATGATCACTCTCACTGCTGCCACATTCGCTGGTGTTGCAGCCACAAGTGGTGCAGGGTCACCGCTTTTGGCTCTGAAGCTATCATCCACTCTCTTGTTTTCTGCGGCCACTGGAATGTCCCTAATCATGAACAAGATTCAGCCCTCACAACTTGCTGAGGAGCAACGCAATGCTACAAGGTTGTTTAAACAGCTTCAGACCCAAATCCAAACAACAATTGCTCTTGGAAATCCAACCGAAGAAGATATGAAGGGTTCAATGGAAAAGGTCTTAGCCCTTGACAAAGCTTATCCTCTACCCTTGTTGGGAGCCATGCTTGACAAGTTTCCTTCAAAATTTGAACCCGCTGTTTGGTGGCCTTCATCTCAGTTCCAAAGGAAAAACAAAACCCACCAAGGAAAAGTATCAAGCAAGAGGAACAATGGATGGAGTGAAGAGCTAGCAAATGGAATTGAGGGAGGTCCTTTACTCACTGGCATTGCAGCAGTAGGATCTGCATTTGTTGGAAATGGATCATTGGCAGCTATAGTGGCTGTCATGGCTGGCTCATTGGCTGCTGCCATCAATGCTTTGGAGCACGGTGGGCAAGTGGGTATGGTGTTTGAAATGTACAGAAATTGCGGCGGATTCTTCCAACTGTTGGAGGAGACAATTGAAGCTGAGATGGAAGAGAAAGACTTTGAGAGGAGACAAAATGGAGAACTCTTGGAAATGAAGATGGCTTTGATGTTGGGGAGAAGTGTGTCACAGCTCAGAGAACTCGCCACAAAATCAGCTTCATGTCGGACCGAGGGAATTGTCGTGGATGAATTCGCCAGCAAACTGTTCTAA 1080 0.4574 MPKILNTTRKLVEGLTFTDSGALLENNVITSTQLHDDSSNSTTSMSTMQLYAILEAVADRVEMHKNIGEQRDNWNTLLLNNINMITLTAATFAGVAATSGAGSPLLALKLSSTLLFSAATGMSLIMNKIQPSQLAEEQRNATRLFKQLQTQIQTTIALGNPTEEDMKGSMEKVLALDKAYPLPLLGAMLDKFPSKFEPAVWWPSSQFQRKNKTHQGKVSSKRNNGWSEELANGIEGGPLLTGIAAVGSAFVGNGSLAAIVAVMAGSLAAAINALEHGGQVGMVFEMYRNCGGFFQLLEETIEAEMEEKDFERRQNGELLEMKMALMLGRSVSQLRELATKSASCRTEGIVVDEFASKLF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00185 359 PANTHER F-BOX PROTEIN WITH A DOMAIN PROTEIN 29 231 IPR027949 -
Pumo4g00185 359 Pfam Petal formation-expressed 237 335 IPR027949 -
Pumo4g00185 359 Pfam Petal formation-expressed 49 232 IPR027949 -
Pumo4g00185 359 Coils Coil 294 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00185 Pumo-Chr4 2277526 2278696 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00185 - - cave:132172904 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00185 4 2277526 2278696 Pumo4g00185 4 2277526 2278696 ECH
Pumo4g00185 4 2277526 2278696 Pumo2g00347 2 6029619 6030921 PCT