Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g00077 ATGAAAGGCCAGAAAAAGTTGAATTCTCCAAGGGGAGAGGTTGGAGAGATTGACACAAGGGCACCATTCCAATCTGTCAAAGCTGCTGTTAGTTTATTTGGGGAAGTAGCCATCACTAGAGACAGATTTTCTGTCAAGAGAAGATCATCAGAGAATGTATTTGAAAAGGAGACGCAGCTTATCTTGGCCCAAAAGGAATTAAACAAGATAAAGAAACAGGTGGACAATGCTGAGGCCATAAAAGCCAAAGCACTTTCTGAGCTTGAGAATGCCAAGGAGATCCTTCAGAATTTGACAACCAAGCTGGCCAACGTGAGAGAATCCAAGCAATCCGCAATGGAAGTTGCTGAAGCTGTGAAGAATCAGGGCAAGCGATTTGAAAAGACACTATCCCTAAAAGCCGTGGGATATGAAGCTTGGAGACAAGAACTAGAACATGCAAGAAAAGCGTACACCACCACTATAACTGAACTAGATTCTTCCAAGCAAGAACTCACCAAAATAAGGCAGGATTTTGATGCAGTTTTGGAGGCAAAGCTGGCAGCATTGCAGGCAGCAGGAGAGGCTCAGCGTTCAGCAAAATTAAACTCAGAAAGGATCAGTGAACTCTCAAATGAAATTGCAACCATGAAAGCATCGATTGAACAATTGAAACTCGCCTCTGAACAATCCCAAGAAGAAAGAGAAGCCCAACTTGTTGGTTATTACACTACTGCCAAGGTAGAAGCACAGAAAAACTTGGAGTCCTTAAAGAATGAATATGATCCCGAACTTATGCAAAGTCTAGACACCAAACTTGCTCAAACGAGTGCTGAGATTGAGGCTCTTCAAGAGCAGATTAAGAAGCTGCACGCTTCTAAGATGGACTCTGTGAGGCTTCTAACTTCAGAGCTTAAAGAAGCCACAAAGACACTTGAGGACGTTGCTGAAGAAAAGAACTCCCTTAAGAAACTGGTGTTTTCTCTAAGGACAGAATTGAAGCAAGTTAAGAAGGAGCAAGATGAAGTGAAGGAGAAGGAACATGCAGCAGAAGCTGTTGCTACTAACCTCACTGGTGAACTGCAAGGGAGGATGGGAGATGCAAGGCCTAAAACAGGCAGTGTGGATGACTTAGAAGCTAACATCTTCTATGTGCAGAGTCTGAAGATTCAGAAGCTACAATTGGAAACCGAAGGTGCAAGAAGAGAAGCAGAAGAGATGAGGAGAAAAGCTCAAGAGCTGAAGCGAGAAGCTGAAAAATCCAGGGCTGTGGCTGAAGAAGCAGAGGAAAAACTTGAGCTCGTTCTGGTGGAAGCTAAAGAGGCAAAAGCAGCTGAACAAAGAGCCGTTAAGGAGATCAAGATTTTGTCTGAAGTGGGTAAAGTCCCGAACTCAAAATTCAATGGCAAGATCAAGATGTCAAATGAAGAGTTTGAGGCACTGAGAGCAAAGGCCAAGGAGTGTGAGGATTTGGTTGAAAAGAAAGAGGCAATTGTGATGGCAGAGCTGCAAGAAATCTATGCAAGAAAGAATGAAGTGGACAGAAAGGTGGAAACTAATCTGAAGGCAATTGAGGAAACAAAGGCTGCAGAGGAGACAGCTTTGTGGAGTGCAGAGATGGCAGATTCAGCAAAAGTGGCAATTGAAAGTGAACTGAGGAGGTGGCGTCAACAACAAATGGTGATACCCGATGCTGCTTCTCAGAAATTGGAGCATTCTGCAGCACCAATCTCGTTGACCATCTAG 1725 0.4383 MKGQKKLNSPRGEVGEIDTRAPFQSVKAAVSLFGEVAITRDRFSVKRRSSENVFEKETQLILAQKELNKIKKQVDNAEAIKAKALSELENAKEILQNLTTKLANVRESKQSAMEVAEAVKNQGKRFEKTLSLKAVGYEAWRQELEHARKAYTTTITELDSSKQELTKIRQDFDAVLEAKLAALQAAGEAQRSAKLNSERISELSNEIATMKASIEQLKLASEQSQEEREAQLVGYYTTAKVEAQKNLESLKNEYDPELMQSLDTKLAQTSAEIEALQEQIKKLHASKMDSVRLLTSELKEATKTLEDVAEEKNSLKKLVFSLRTELKQVKKEQDEVKEKEHAAEAVATNLTGELQGRMGDARPKTGSVDDLEANIFYVQSLKIQKLQLETEGARREAEEMRRKAQELKREAEKSRAVAEEAEEKLELVLVEAKEAKAAEQRAVKEIKILSEVGKVPNSKFNGKIKMSNEEFEALRAKAKECEDLVEKKEAIVMAELQEIYARKNEVDRKVETNLKAIEETKAAEETALWSAEMADSAKVAIESELRRWRQQQMVIPDAASQKLEHSAAPISLTI 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g00077 574 Coils Coil 464 491 - -
Pumo4g00077 574 Coils Coil 259 286 - -
Pumo4g00077 574 Coils Coil 200 227 - -
Pumo4g00077 574 Coils Coil 60 122 - -
Pumo4g00077 574 Coils Coil 291 349 - -
Pumo4g00077 574 Coils Coil 383 438 - -
Pumo4g00077 574 Pfam Weak chloroplast movement under blue light 16 552 IPR008545 -
Pumo4g00077 574 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 15 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g00077 Pumo-Chr4 1140394 1142433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g00077 - - gmx:100805288 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g00077 4 1140394 1142433 Pumo2g00238 2 4507069 4509414 PCT