Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03173 ATGGGACTCACAACACTGAAGGCAGAGAACCTGAAGCCAGTAATCCTCAAAGCTGGTGTTCCCTTGGCTGCATCTTTGGCTGGTTTGATCTATGCATGGATTGTGGCAAAGAAAAACTTGTCTACTAAAGTTTTTTCTTCACCAGAAAATGAGTGTGATTCTCCAAAAATCACTTGTCATCAGGGAACTAAACTTCATGAAGAAAGCTTTCACAACCTTTCTTCTTTGGAAGATGAAGAATCATCATCTTCTCCCATGAATACTGGGAGCTTGGTGATCCCTGACAACAACCCTTGTTTGGAACAAGAGATCACTAGCCTCAGAAGCCAGATTGAAGGTCTTCAAATGAGGGAATTGGCCTTGCGTTTGCAGTTTGAGCTGTATTGTGAAATGAAGGAACAGGAATCTTTACTTCTAGAAGTCAAAAACATGTTGTCTTTGGAGAATGATCGTGTTGAGTTCTTGAGTAAAGAGATTTCGTCCATAGAGACCGAGACTATGAGGTTGGAGAGTTTTGTAGTTCAATACATGAGTGTTGTTGAACAGCTTCAGTATTGGAAATCACAGAATAGGGTGCTCCAAAGGAGGGTTCAGAGGCTACTTAGGGACTCAAAGGCCAAATCTCGTTTGATAAAGGGTCAGGCTTTAAAGATCAAAGAGATAGAAGCAGAAATATTGAGAAACCATGATGCCTTGCAAACCAGGGTCAGTGTCATTAACAAGTTAGAGGGTGAAATCAGAGAGCTGCAAAGGATTTTGGATCAATTGGGGGATGAGAAGAATGAGGTTGTGAAGAGGCTTGAAACAGCTGAAGCATATGCATCTAAGTTGTACAAGGAAAAGATACATAGAAAACCTTTGAAATATTATTTGGAGGTTGAATCAGGTGATGTGAGTAAGGAAGATTACAACAAGGTTCTCAATGAATTGGAGGAGGTCAAGAAGGAACGCGCAACTGAAGTTGAAGAGCTGATTCATTTGAGGAGGGTCAATGTTTGCTTAAGGGAAGAGTTGATGAGGCACTATGAAGAACAACATGAGCAGGAGAGAGACCATGTAGAGGTGGAACTTGAAGGAGGCTTAGGAGTTGTGAAATATGACTCAGAGCATGAATTGCATCATTCCCTTTTGGAGCATCACAATGGTTCTGCTCATGGTGATCATGCTTCTTCCAAAAGGAGAAAGTTGCTTAAGAGGCTCAAGAGGTGGGTTGAAGGCAGTGAAAAGGTAAGAGTGAAGCCTGAAATTAAGTGCCTTGATATGCATTCTGGTTCCTATGGATCAAAGAAACCACAAGTTCCTCCAAGTGCAAGGTTCTGCTCTAGTGCTTGA 1332 0.4174 MGLTTLKAENLKPVILKAGVPLAASLAGLIYAWIVAKKNLSTKVFSSPENECDSPKITCHQGTKLHEESFHNLSSLEDEESSSSPMNTGSLVIPDNNPCLEQEITSLRSQIEGLQMRELALRLQFELYCEMKEQESLLLEVKNMLSLENDRVEFLSKEISSIETETMRLESFVVQYMSVVEQLQYWKSQNRVLQRRVQRLLRDSKAKSRLIKGQALKIKEIEAEILRNHDALQTRVSVINKLEGEIRELQRILDQLGDEKNEVVKRLETAEAYASKLYKEKIHRKPLKYYLEVESGDVSKEDYNKVLNELEEVKKERATEVEELIHLRRVNVCLREELMRHYEEQHEQERDHVEVELEGGLGVVKYDSEHELHHSLLEHHNGSAHGDHASSKRRKLLKRLKRWVEGSEKVRVKPEIKCLDMHSGSYGSKKPQVPPSARFCSSA 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03173 443 Coils Coil 97 117 - -
Pumo3g03173 443 Coils Coil 239 266 - -
Pumo3g03173 443 Coils Coil 300 323 - -
Pumo3g03173 443 MobiDBLite consensus disorder prediction 422 443 - -
Pumo3g03173 443 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 12 346 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03173 Pumo-Chr3 58357834 58359546 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03173 - - gmx:100776941 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g03173 3 58357834 58359546 Pumo3g03173 3 58357834 58359546 ECH
Pumo5g03119 5 79961232 79963460 Pumo3g03173 3 58357834 58359546 PCT