Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g03164 ATGGCGTCAAGGCAACAAGAGGAACGAGCTGAGGCAGCTGCAAGAGTTGCTGCCAAGGAACTTGAGCAAGTCAACAGAGAAAGAGACCGTGATTTGGGTGTTGCTGTGGACCAACACCAGCAGCATGATCAGGAAAACCGTGGTGTAATTGGGTCCGTGTTTAAGGCGGTGCAAGACACCTACGAGAATGCCAAGGAAGCTGTTGTTGGCAAGAAAGACCCTGCAACGGATAATGCCTACACTGCCACAGAGGTTATTGATGATGTTAATATTCAACCCGATGATGACGTGGCAACACGAGGAGAAGTGAGAGACATATCAGCCACCAAATCTCCCGGGATCTTCGATTCTGCCACTGACGGTTCCAAGGCCGGAGAGTACACAGATTATGCTTCTCAGAAGGCAAAGGAAACAAAAGATGCAACGAAGCAAAAGGCTGGAGAGTACTCAGATTATACTTCTCAGAAGGCCAAGGAAACAAAGGATGCAACGAAGCAGAAGGCAGGGGAGTACACAGACTATACTTCTCAGAAGGCGAAGGAGACAAAGGATGCAACGAAGCAAAAAGCTGGAGAATACACAGATTATGCTTCTCAGAAGGCAAAGGAGGCGAAGGACAAGACGATGGAGAAGGGTGGGGAGTATACAGACTATGCTGCTGAGAAGGCTAAAGAAGGAAAAGATGCTACTGTGAATAAGATGGGTGAGTATAAGGATTACACTGCGGAGAAGGCGAAAGAAGGGACAGATGCAACGAAGCAGAAAGCTGGAGAATACACAGATTATGCTTCTCAGAAGGCGAAGGAGGCGATGGACAAGACAATGGAGAAGGGTGGAGAGTATAAAGACTATGCTGCAGAGAAGGCTAAGGAGGGAAAGGATGCTACGGTGAATAAGATGGGTGAGTATACGGATTACACTGCGGAGAAGGCGAAAGAAGGGAAAGATACAACATTGGGGAAGCTTGGGGAGCTGAAGGACTCTGCTGCGGATGCGGCTAAGAGGGCCGTGGGTTACTTGAGCGGCAAGAAAGACGAAACTAAAGAGAAGGCTGCCGAAACTGCTGAGGGGGCGAAGAACAAGAGTGCAGAAACTGCTGAGGCGGCGAAGAATAAGGCTGTGGAGATGAAGGATGCTGCGAAGGACAAGGCTGCAGAGACCACAGATGCAGCAAAGCGGAGAACTGCACAGGCAACAGATGCAGCAAAACAGAAAACTGCACAGGCAAAGGAGAACACCAAGGAAAATGTGAGTGGTGCAGATGAAGCTGAAAGGAGGAAAATGGAGGACCTAAGGCTGCAAGGTAAAGGTTACGGAGGTGAATCTGCAACGGGTCGTGGAGACAAGGTGGTGTTGAAAATGGAAGAGTCTCGACCAGGGGCCATGGCGGATACGCTCAACGATGTGGGACCCTTCGATGAAGAAGGGGTCGTCAATGTGGAGCGCCGCAAAAAATAA 1458 0.4959 MASRQQEERAEAAARVAAKELEQVNRERDRDLGVAVDQHQQHDQENRGVIGSVFKAVQDTYENAKEAVVGKKDPATDNAYTATEVIDDVNIQPDDDVATRGEVRDISATKSPGIFDSATDGSKAGEYTDYASQKAKETKDATKQKAGEYSDYTSQKAKETKDATKQKAGEYTDYTSQKAKETKDATKQKAGEYTDYASQKAKEAKDKTMEKGGEYTDYAAEKAKEGKDATVNKMGEYKDYTAEKAKEGTDATKQKAGEYTDYASQKAKEAMDKTMEKGGEYKDYAAEKAKEGKDATVNKMGEYTDYTAEKAKEGKDTTLGKLGELKDSAADAAKRAVGYLSGKKDETKEKAAETAEGAKNKSAETAEAAKNKAVEMKDAAKDKAAETTDAAKRRTAQATDAAKQKTAQAKENTKENVSGADEAERRKMEDLRLQGKGYGGESATGRGDKVVLKMEESRPGAMADTLNDVGPFDEEGVVNVERRKK 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g03164 485 MobiDBLite consensus disorder prediction 130 213 - -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 194 237 IPR004238 -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 304 335 IPR004238 -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 238 281 IPR004238 -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 260 303 IPR004238 -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 123 149 IPR004238 -
Pumo3g03164 485 Pfam Late embryogenesis abundant protein 151 193 IPR004238 -
Pumo3g03164 485 Gene3D - 305 356 - -
Pumo3g03164 485 Gene3D - 122 173 - -
Pumo3g03164 485 Gene3D - 262 304 - -
Pumo3g03164 485 Gene3D - 215 261 - -
Pumo3g03164 485 Gene3D - 174 214 - -
Pumo3g03164 485 Coils Coil 363 386 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 338 449 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 29 44 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 29 49 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 338 357 - -
Pumo3g03164 485 Coils Coil 2 27 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 363 390 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 102 213 - -
Pumo3g03164 485 MobiDBLite consensus disorder prediction 407 434 - -
Pumo3g03164 485 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 227 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g03164 Pumo-Chr3 58270225 58271956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g03164 - - gmx:100786618 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g03124 5 80011584 80015079 Pumo3g03164 3 58270225 58271956 PCT