Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02596 ATGAAACGCATAGACATCTTCTGTGCTTCCCAAGCCTCAACAGCTATATGTCTCAGCATGGATCAAGCCTCATGCTCCTCTTCTTCCAATACCATTCTACTTGGAGGCCGAACCATTGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCCCTCACTGCCCCATGTACCTCTTCTCAGTCACCCATCAACCCCAAGCCTTACCATGAGCTCCACAAGGCCAAGAAAAACTCTTCTTCAAAAAATGCAACAAAGGGCCATGACCAAAAGAAGAAAAGTACAGCAGAAAAACTCACTGAACATGTCACCGACAACACTTCTAAACCAGTTGATAGCATTGTGCGTAGGAGTTGGCTTAAGCCACCTTCTGATTTAATCACTCCTCCTGGTTCAACTAGATCTTTGCTCAGTGACACTGCCTTATTGGGTGGTTCATCAGATTATGATCCAGTTTTGGCATTAACTACTACGGTTAATAACAACAAAACTTCTCAAGTTGTTCATCAAGATGAAGCCAATCCTGTTTCTAAACTTCCTAGCTCTTCTCATCCAAAATCAGGTTCCTCAGACCAGGTTGTGGTATTGAGGGTATCTTTGCATTGCAAAGGCTGTGAAGGGAAGGTGAGGAAGCACCTCTCTAGAATGCAAGGAGTTACTTCCTTCAACATAGATTTTGCGGCAAAGAAGGTGACAGTAGTTGGGGATGTGACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAAAATGCACAATTATGGCCAGCATCTGCCTCAGCAGTGGGATCTGGTACTGTTGAAACAAAGAAATTTTTTTTATCTAATTAA 843 0.433 MKRIDIFCASQASTAICLSMDQASCSSSSNTILLGGRTIDRHNPIINDSRRSTSKSLTAPCTSSQSPINPKPYHELHKAKKNSSSKNATKGHDQKKKSTAEKLTEHVTDNTSKPVDSIVRRSWLKPPSDLITPPGSTRSLLSDTALLGGSSDYDPVLALTTTVNNNKTSQVVHQDEANPVSKLPSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPASASAVGSGTVETKKFFLSN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02596 280 CDD HMA 199 252 IPR006121 GO:0046872
Pumo3g02596 280 MobiDBLite consensus disorder prediction 41 120 - -
Pumo3g02596 280 ProSiteProfiles Heavy-metal-associated domain profile. 195 261 IPR006121 GO:0046872
Pumo3g02596 280 MobiDBLite consensus disorder prediction 49 70 - -
Pumo3g02596 280 Gene3D - 194 257 - -
Pumo3g02596 280 MobiDBLite consensus disorder prediction 73 109 - -
Pumo3g02596 280 MobiDBLite consensus disorder prediction 171 194 - -
Pumo3g02596 280 Pfam Heavy-metal-associated domain 200 252 IPR006121 GO:0046872
Pumo3g02596 280 PANTHER OS08G0405700 PROTEIN 4 265 IPR044526 -
Pumo3g02596 280 SUPERFAMILY HMA, heavy metal-associated domain 196 253 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02596 Pumo-Chr3 39154926 39156724 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02596 - - gmx:100813295 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02596 3 39154926 39156724 Pumo3g02596 3 39154926 39156724 ECH
Pumo5g02983 5 77733228 77737069 Pumo3g02596 3 39154926 39156724 PCT