Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02403 ATGGCTGCTTCAATCTCAAACACGCTCATTATTCCCTTTTCCAAACCACACGAAGCTAGCTTCCGATTACCCCACTCCAAATTCCCAACATCACCTCTCACGCGAACCCAAAAATCAATAAAACTCGTTACACGTGACAACTCCTCATCCACCATCGGCGAGCTCGTGCGAGAACAAGAACACGAACAAGCAACAATAACGCATCATCACACAGAGAGAAACACAAACAACAACAATTACAAGGCCAAGTTAGAGGAGCACCTGGAGCGACTCCCGGAAGCGTGGCGCGAAATCCACGGCGAGAGCGACTGGGCCGGGCTTCTGGAGCCTATGGACCCACTTTTGCGAGCGGAAGTGATCCGCTACGGCGAGATGGCCCAGGCCTGCTACGACGCCTTTGACTTCGACCCGTTCTCGAAATACTGCGGCAGCTGCAGGTTCACGCGCCGCAACTTCTTCTCCTCCCTCGAGATGTCGTCCCACCTCGGCTACGCCGTCACGCGCTACCTCTACGCCACCGCCAACATCAACCTCCCCAACTTCTTCAAGCACTCCCGCTGGTCCAAGATGTGGAGCAAGCACGCCAACTGGGCCGGATACGTCGCCGTTTCGGACGACACCACAAGCAAACGCCTCGGGAGAAGAGACATCACAATAGCATTCCGCGGTACCGTCACCCGCCTCGAGTGGGTTGCGGACCTCATGGATTTCCTCAAACCAATCTCATCAAACGGCATCCCCTGCCCCGATCAGACGGTCAAGGTCGAATCAGGGTTTCTAGATCTCTACACGGACAAAGAAGAGAGTTGCGGTTATGCCAAATACTCCGCCAGAGAACAGGTTTTATCCGAAGTGAAGCGGTTGTTGGAGATTTACCATAACGAGGAAGTGAGTGTTACGATAACGGGGCATAGTTTGGGGAGCGCGTTGGCGATTTTGAGCGCTTACGATATTGTGGAGACGGGGGTGAACGTTATGAGGGATAGTAGGGGTGTTCCGGTTTCGGTGATGTCGTTTTCGGGGCCCAGGGTTGGGAACGTGAGGTTTAAGGAGAGGTTGGAGAGGCTCGGGGTGAAGGTTTTGAGGGTGGTGAACGTGCATGACGTGGTGCCTAAGGCTCCCGGAGTTGTGTTTAACGAACACTTGCCGGCGCCGGTGATGAAGGTGGCGGAGGGGTTGCCGTGGAGTTACTGGCACGTTGGGGTGGAGCTGGCGTTGGACCATAAGAAGTCGCCGTTTCTCAACCCCAATGCTGATGCTGTCTGCGCGCATAACTTGGAGGCTCTTCTGCATCTGCTTGACGGATACCATGGAAAGGGTGAAAGGTTCGTGCTAGCGAGTGGTAGGGATCCTGCTCTGGTGAACAAGGGATGTGATTTCCTGAAAGACCATTACTTGATTCCACCAAACTGGAGACAAGATGCGAACAAGGGCATGATCAGAAGCAATGACGGACGCTGGATGCAGCCTGAGCGACCAAAGCTTGACGATCACCCTGAAGATATGCATCACCATCTCACCCAACTCGGTCTGCACGCTTCATCTGATATATGA 1554 0.5399 MAASISNTLIIPFSKPHEASFRLPHSKFPTSPLTRTQKSIKLVTRDNSSSTIGELVREQEHEQATITHHHTERNTNNNNYKAKLEEHLERLPEAWREIHGESDWAGLLEPMDPLLRAEVIRYGEMAQACYDAFDFDPFSKYCGSCRFTRRNFFSSLEMSSHLGYAVTRYLYATANINLPNFFKHSRWSKMWSKHANWAGYVAVSDDTTSKRLGRRDITIAFRGTVTRLEWVADLMDFLKPISSNGIPCPDQTVKVESGFLDLYTDKEESCGYAKYSAREQVLSEVKRLLEIYHNEEVSVTITGHSLGSALAILSAYDIVETGVNVMRDSRGVPVSVMSFSGPRVGNVRFKERLERLGVKVLRVVNVHDVVPKAPGVVFNEHLPAPVMKVAEGLPWSYWHVGVELALDHKKSPFLNPNADAVCAHNLEALLHLLDGYHGKGERFVLASGRDPALVNKGCDFLKDHYLIPPNWRQDANKGMIRSNDGRWMQPERPKLDDHPEDMHHHLTQLGLHASSDI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02403 517 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 44 493 - -
Pumo3g02403 517 FunFam Phospholipase A1-II 3 94 499 - -
Pumo3g02403 517 Gene3D alpha/beta hydrolase 94 502 IPR029058 -
Pumo3g02403 517 Pfam Lipase (class 3) 219 376 IPR002921 GO:0006629
Pumo3g02403 517 CDD Lipase_3 149 408 - -
Pumo3g02403 517 SUPERFAMILY alpha/beta-Hydrolases 180 437 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02403 Pumo-Chr3 36494215 36500004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02403 81 511 Acyl Lipid Metabolism Gene Families AT2G30550 67.202 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02403 - - gmx:100779676 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02812 5 75212592 75214984 Pumo3g02403 3 36494215 36500004 PCT