Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02350 ATGGGTCAAGGCTTGAGTGTGGGAATAGATGACTTGGGAAACCATTGCCTCTGCAAGGTTGAGATAAAGCCATGGCTCTTCTCAAAGAGAAAAGGGTCCAAGAATTTGGAGGTCCAATCTGGTAAAATTGACATCTTTTGGGATTTGAGTTGTGCCAAGTTTGGTTCAGGGCCTGAGCCATTGGAGGGGTTCTACTTAGCGGTTGTGTTCAACAAGGAGATGGTGTTGCTCCTAGGGGATCTGAAAAAGGAGGCATGCAAGAAGATTGACAGTGATTGTGCTTTTTCTCACTGTGGTGCCGCTTTCATTGCAAAGAGAGAGCACATTTTCGGGAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTGTGACAAGGGGCAGGTGCATGATGTCACAATTGAGTGTGACACTATGGGGCTCAACGATCCCTCTCTTGTGAAGCGTCTCAAGTGGAAATTCCGAGGGAATCACACCATTTTGGTGGATGGTGTTCCGGTTGAAGTGTTTTGGGATGTGCATAGTTGGCTCTTTGGAAATGCTATGGGCAATGCAGTGTTCATGTTCCAAACATGCATTTCAAATGACAAGTTGTGGGAAGGCCAATCAGTTTCTGATCCCTCATGGGCTTCTTCTCAGCAGTTTAGGGATTCCCAATTGCAAGGCTTTGGGTTCTCTCTCATTTTGTATGCTTGGAAACATGAGTAG 702 0.4573 MGQGLSVGIDDLGNHCLCKVEIKPWLFSKRKGSKNLEVQSGKIDIFWDLSCAKFGSGPEPLEGFYLAVVFNKEMVLLLGDLKKEACKKIDSDCAFSHCGAAFIAKREHIFGKKFYGAKAQFCDKGQVHDVTIECDTMGLNDPSLVKRLKWKFRGNHTILVDGVPVEVFWDVHSWLFGNAMGNAVFMFQTCISNDKLWEGQSVSDPSWASSQQFRDSQLQGFGFSLILYAWKHE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02350 233 PANTHER EXPRESSED PROTEIN 1 231 IPR008586 -
Pumo3g02350 233 Pfam Plant protein of unknown function (DUF868) 1 231 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02350 Pumo-Chr3 35774815 35775550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02350 1 233 EF-hand Containing Proteins AT3G04860 57.317 1.90e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02350 - - gmx:100793503 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02350 3 35774815 35775550 Pumo3g02350 3 35774815 35775550 ECH
Pumo5g02771 5 74581356 74582764 Pumo3g02350 3 35774815 35775550 PCT