Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02313 ATGGGTAAGGGGATTGGGATTGGGAAGTACATAGCGTCGGATATATTCTCGGTGGGAGGGTACGATTGGGCGATCTATTTCTACCCCGATGGGAAGAGCGTGGAGGACAATGCTACGTACGTTTCGCTCTTCATCGCGCTCGCTAGCGAAGGCACCGACGTTAGGGCGCTTTTTGAGTTGACGCTTTTGGATCAGAGTGGGAAGGAGAGGCACAAGGTGCATAGCCATTTTGAGAGGACCCTCGAGAGTGGACCCTACACGTTAAAATACCGTGGTAGCATGTGGGGTTACAAGCGGTTTTTTAAGAGAACAGCACTAGAGACATCAGATTACCTTAAAGATGATTGCCTTAGTGTTAATTGTAGTGTTGGTGTTGTGAAGTCACACACAGAGGGCCCTAAAATATATAAAATCCCAATTCCGCCTTCTAACATTGGTCAGCAATTTGGGAAGCTACTAGAAAGTGGGAAAGGCAGTGATGTTAGTTTTGAAGTGAACGGAGAAATATTTGCTGCTCATAAATTGGTTCTAGCAGCTCGCTCACCTGTTTTCAGGGCCCAACTTTTCGGTCCGATGAAAGATCAGAATACCCATTGTATAAAAGTTGAAGACATGGAGGCTCCAGTTTTCAAGGCATTACTTCATGTTATATATTGGGACTCACTACCTGACATGCAAGAGCTTACTGGGTTGAACTCAAAATGGGCTACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGGCTTAGAGAGACTTAGGCTTATGTGTGAAGCAAGTCTCTGTGAAGATGTTGCGATAAACACTGTTGCTACGACTCTGGCCTTGGCAGAACAGCACCATTGTTTCCAACTGAAAGCAGTCTGTCTGAAATTCGTTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTTGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTTCTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCTTGTGCAAGCATAGGAATGAAGCAATACTTGATGGCAGCGACATAAATGGAAGGCGGGTGAAGCAAAGGCTATAG 1089 0.4564 MGKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVKSHTEGPKIYKIPIPPSNIGQQFGKLLESGKGSDVSFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKDQNTHCIKVEDMEAPVFKALLHVIYWDSLPDMQELTGLNSKWATTLMAQHLLAAADRYGLERLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFVARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEAILDGSDINGRRVKQRL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02313 362 ProSiteProfiles BTB domain profile. 159 218 IPR000210 GO:0005515
Pumo3g02313 362 Pfam BTB/POZ domain 150 266 IPR000210 GO:0005515
Pumo3g02313 362 Gene3D Potassium Channel Kv1.1; Chain A 135 262 IPR011333 -
Pumo3g02313 362 CDD BTB_POZ_BPM_plant 145 265 - -
Pumo3g02313 362 ProSiteProfiles MATH/TRAF domain profile. 1 123 IPR002083 GO:0005515
Pumo3g02313 362 SUPERFAMILY POZ domain 136 266 IPR011333 -
Pumo3g02313 362 FunFam BTB-POZ and math domain 1 268 345 - -
Pumo3g02313 362 SUPERFAMILY TRAF domain-like 6 125 - -
Pumo3g02313 362 SMART math_3 3 106 IPR002083 GO:0005515
Pumo3g02313 362 Gene3D - 268 344 - -
Pumo3g02313 362 CDD BACK_AtBPM-like 265 328 IPR034090 -
Pumo3g02313 362 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 4 326 IPR045005 GO:0016567
Pumo3g02313 362 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 2 128 IPR008974 GO:0005515
Pumo3g02313 362 CDD MATH 6 123 IPR002083 GO:0005515
Pumo3g02313 362 SMART BTB_4 159 268 IPR000210 GO:0005515
Pumo3g02313 362 FunFam BTB-POZ and math domain 1 135 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02313 Pumo-Chr3 35304295 35307803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02313 K10523 - gmx:100799666 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02313 3 35304295 35307803 Pumo3g02313 3 35304295 35307803 ECH
Pumo5g02728 5 73941949 73945491 Pumo3g02313 3 35304295 35307803 PCT