Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01693 ATGACTACTGTCATAGAAAAACTGGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTGGGTGTTAGGCAATGGCCCAAATGGGGTTGCCCTCCAAGCAAGTTCCCATGGACATATGAAGCCAAAGAGACTTGCTATCTTCTGGAAGGAAAAGTGAAGGTCTTTCCTAGTGGGTCAAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCCAAAGGGATGAGTTGCTACTTGGGATGTGTCTGTTGGTGTAGACAAGCACTATAA 288 0.4618 MTTVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEAKETCYLLEGKVKVFPSGSNESVEIAAGDLVVFPKGMSCYLGCVCWCRQAL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01693 95 CDD cupin_TM1112-like 29 83 - -
Pumo3g01693 95 PANTHER OS04G0445200 PROTEIN 4 85 - -
Pumo3g01693 95 Pfam EutQ-like cupin domain 22 83 IPR008579 -
Pumo3g01693 95 Gene3D Jelly Rolls 1 88 IPR014710 -
Pumo3g01693 95 SUPERFAMILY RmlC-like cupins 17 86 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01693 Pumo-Chr3 26046400 26047791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01693 K06995 - gmx:100527470 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02735 6 65635885 65636905 Pumo3g01693 3 26046400 26047791 PCT