Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01687 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTACCTCAGCACTTTGAAAATGGGTCAAAAGTGCAAAGAGCCAGATGTGGCTGAGTTTATATCAGCACTAGCTGCAGGAAACAATGCACAACTTATGGTTGTGGCATGTGCTGGTGCAGCAGACTCCACCACACTAGCATTGGTTGCTGCTGCTCATCAAACTGGTGGCCAAGTCATTTGTATTGTCCCTGGCCATGAAGAGCTAAGAGCCTCCAAAATTGCCTTGGGAGTGGCTTCTCACCAAGTTCAATTCATGGTTGGAGAAGCTCGGGAACTGCTGCTAGACCACTACCACTTTGATCAGGCAGCTGATTTTGTGCTCATTGACTGCAACCTTGAGAACCATGAAGAGATCCTTAGAGCAGTTCAAGAGGGTAGGAAGCAAAATGGCACAGTGGTTGTGGGGTACAATGCATTTAGCTGCAGAAAGTCCTGCTTGTCTTGTGGATCAAAAACACAGCTTCTACCTATAGGAGGTGGTTTGCTTGTGACTAGATTTGGGGTCACTGAAACAAGTCCAAAATATGGCAGCAGAATGGGAAAAGTCAAAAGCCGTTGGGTTGTGAAGGTAGATAAATGCACAGGCGAGGAGCATGTGTTCAGGGTCAGATTTCCTCAAAGGAAAGTGATCCAAGCTTAA 675 0.4681 MACWSAENATKAYLSTLKMGQKCKEPDVAEFISALAAGNNAQLMVVACAGAADSTTLALVAAAHQTGGQVICIVPGHEELRASKIALGVASHQVQFMVGEARELLLDHYHFDQAADFVLIDCNLENHEEILRAVQEGRKQNGTVVVGYNAFSCRKSCLSCGSKTQLLPIGGGLLVTRFGVTETSPKYGSRMGKVKSRWVVKVDKCTGEEHVFRVRFPQRKVIQA 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01687 224 Gene3D Vaccinia Virus protein VP39 5 177 IPR029063 -
Pumo3g01687 224 Pfam Protein of unknown function (DUF1442) 3 213 IPR009902 -
Pumo3g01687 224 PANTHER DUF1442 FAMILY PROTEIN 3 213 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01687 Pumo-Chr3 25994836 25995879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01687 - - gmx:100816283 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01687 3 25994836 25995879 Pumo3g01687 3 25994836 25995879 ECH
Pumo6g02731 6 65598356 65599634 Pumo3g01687 3 25994836 25995879 PCT