Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01684 ATGTCCAAACCTCAAAATGATCCCCTTTCGCAATCGGAAACAACTTGTGGAACACTTCTCTATGAACTTCAGATAATATGGGACGAAGTTGGGGAGTCTGAGACTGACAGAGATAGAATGCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACCGAAGGAAGGTAGATCTGGCAAATCGGTCTAGAGCTCAATTAAGGCAGGCAATTGCTGATTGTGAGGCAGAACTTGCAGCCATTTGTTCATCAATGGGAGAGAGACCAGTGCATATTCGACAGACCGATCAAAATGCTGGAAGCCTGAAGGAGGAGCTTGCAAGAATTCTTCCGCAGTTGGAGGAGATGCAAAAAAGGAAATCTGAGCGCAGAAATCAATTTATAGAAGTTCAAGAGCAGATTCAAAGCCTTTCAATTGAATTATATGGTCCCAAAGAGTATATTCCTGCCGTCGTAGATGAAACTGATTTATCCTTGAGAAAACTTGAAGAATTGCACAGGCAGCTGCATGCACTTCAGATTGAGAAGAGTAGTCGCTTAAAGCAAGTCCAGGAGCACCTGTATACATTAAATTCTCTTTGTTTAGTGCTTGGTTTGGACTTTAAGCAGACAATTAATGGAATTCATCCCAATTTAGTGGACTCAGAAGGATCTAAGAGTGTAAGTAATGACACCATTCAGCAATTAGCTGTTGCTATACAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACTACAATGTTGGAGCTCTGGAACTTGATGGATACCCCTATTGAAGAGCAACAGATGTTTCAGAATGTTACATGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCCGTGGACTTCATCAATTTGGTTGAGGCAGAAGTAGCTAGGTTAGAAGAGTTAAAATCAAGCAAGATGAAGGAGCTTGTATTAAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTGATTCCTGAAATAGATAATGTAGTGGAATCCGCTGTTGATGCCATAGAATCTGGTAACTTTCTGCTTTCTAGCAAGTCGATTGCAATTATTTCCTATGCAAACTTAAAAGTCTGCCTCTTCTTTTTTGATGCAGGATCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGATTTCCCAAGTCAAAGAGGAAGCTTTTAGCAGAAAAGAGATACTTGAAAAGGTTGAGAAATGGTTGGCTGCATGCGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGATAATCGATACAATGCTGGGAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTAACAAAATTCCAGGAATGGTGGATGCTTTGACTTCAAAAACTATTGCATGGGAAAAGGAAAAAGGCAATGAGTTCACATATGATGGTATTCGACTACTTTCTATGCTTGAAGAATACACTATATTACGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAGCGGGATCTGAAGAAACTCCAGGGACAAATGATAGCTGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAAAGTGTTAAAAAGGGACCTAGGATGTCAACCGGAGGTGCAGCTAGTAGAAGAGTCTCACTGGGAGGAGCAATGCTTCAAACTCCAAAACCTGATTCAAAAGCTACTCACTCACGTGCCGCGAGAAAGACTGACAAAGCGCACCAAATTGAGCATCTAAATTACCTGGATGATGGCATTTCAGGTTTATCAGCAGCTAGAAGAGGGCTGGATATTGCTGGCGTTCCTGTAAAAAAACACTCATTTGGTGCGGGTACTCAAATCATAGAATCTCCTCTGATACGACAACCTTTTTCTCCCCTCTCTTCTAACAGTGTATCTTCAAAAGCTAATGTAGCAAGTGCTACAGATGAACTGAATAAACAGAGTGAGAAGTTGCAGAGAACAGTGTCGCTTAACAATGCGCCATATACTACTCCCTCCAAGACAGCTACTACTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCAATGCTTATTCCTGTCCCAGCTACCCCTTCAACAGTATCAGTTCCAATGAATATGGCCATGACTCCAGTTCCTTCATCTATTTTGAAGAATATAAGCTTGAATTCAACTCCCACATCAGTTCCTTATGGAAATGACTTGGTTCAAGAGGTTGAATATTCCTTTGAGGAAAAAAGGCTCAGTTATATGTTAGCATGA 2265 0.4168 MSKPQNDPLSQSETTCGTLLYELQIIWDEVGESETDRDRMLFELEQECLEVYRRKVDLANRSRAQLRQAIADCEAELAAICSSMGERPVHIRQTDQNAGSLKEELARILPQLEEMQKRKSERRNQFIEVQEQIQSLSIELYGPKEYIPAVVDETDLSLRKLEELHRQLHALQIEKSSRLKQVQEHLYTLNSLCLVLGLDFKQTINGIHPNLVDSEGSKSVSNDTIQQLAVAIQELREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEVTEPNTLSVDFINLVEAEVARLEELKSSKMKELVLKKRTELEEICRKTHLIPEIDNVVESAVDAIESGNFLLSSKSIAIISYANLKVCLFFFDAGSVDPACVLEQIELQISQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPGMVDALTSKTIAWEKEKGNEFTYDGIRLLSMLEEYTILRQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPDSKATHSRAARKTDKAHQIEHLNYLDDGISGLSAARRGLDIAGVPVKKHSFGAGTQIIESPLIRQPFSPLSSNSVSSKANVASATDELNKQSEKLQRTVSLNNAPYTTPSKTATTVVDEENRTPKAMLIPVPATPSTVSVPMNMAMTPVPSSILKNISLNSTPTSVPYGNDLVQEVEYSFEEKRLSYMLA 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01684 754 Gene3D - 393 526 - -
Pumo3g01684 754 Coils Coil 485 515 - -
Pumo3g01684 754 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 534 - -
Pumo3g01684 754 FunFam 65-kDa microtubule-associated protein 6 393 526 - -
Pumo3g01684 754 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 614 IPR007145 GO:0000226|GO:0008017
Pumo3g01684 754 MobiDBLite consensus disorder prediction 520 579 - -
Pumo3g01684 754 Coils Coil 112 132 - -
Pumo3g01684 754 Coils Coil 295 315 - -
Pumo3g01684 754 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01684 Pumo-Chr3 25933983 25939623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01684 10 566 EF-hand Containing Proteins AT5G62250 55.379 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01684 K16732 - gmx:100777734 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02723 6 65500020 65506452 Pumo3g01684 3 25933983 25939623 ECH
Pumo3g01684 3 25933983 25939623 Pumo3g01684 3 25933983 25939623 ECH
Pumo6g02723 6 65500020 65506452 Pumo3g01684 3 25933983 25939623 PCT